Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00037 ATGGCAATTGGGATCATGGAGGTGCATCTTGTGAAAGCAAAAGGCCTGCAGAACAATGATATCTTTGGTAAAATGGACCCCTATGTTCTGATACAATACAAAGGCCAAGAGCAGAGGAGCAGTGTTGCCATTGACCAAGGCAGAAATCCTGAGTGGAATGAGAAATTTACCTTCAGAGTGGAATACCCTGAAGCAGGATCAGGCAAAAGCAAGCTCATCCTCAAAATCATGGACGAGGACACATTATCTGCTGATGACTTTATTGGACAAGCCACAATCTATGTAGGGGATTTATTGGCACAAGGGATAGAGAATGGAGGAGCTAAGCTACACCCTCAAAAGCATAGAGTGGTTTGTGAAAACCAGTCTTATTGTGGTGAAATTACTGTTGGTATCACTTTCACCCCAAAG 411 0.4331 MAIGIMEVHLVKAKGLQNNDIFGKMDPYVLIQYKGQEQRSSVAIDQGRNPEWNEKFTFRVEYPEAGSGKSKLILKIMDEDTLSADDFIGQATIYVGDLLAQGIENGGAKLHPQKHRVVCENQSYCGEITVGITFTPK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00037 137 PANTHER C2 DOMAIN-CONTAINING 3 136 - -
Sebi499g00037 137 Pfam C2 domain 4 102 IPR000008 -
Sebi499g00037 137 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Sebi499g00037 137 Gene3D C2 domain 2 137 IPR035892 -
Sebi499g00037 137 CDD C2_putative_Elicitor-responsive_gene 4 128 - -
Sebi499g00037 137 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 136 IPR035892 -
Sebi499g00037 137 SMART C2_3c 5 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00037 Sebi-Chr499 720308 721526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00037 3 110 C2H2 Transcription Factor Family AT4G21160 31.481 2.95e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00037 - - gmx:100791344 192.971