Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00036 ATGGCAATTGGGTTCATGGAAGTGCAGCTTCTCAAAGCAAAAGGCCTGCACAACACTGATATCTTTGGTAGAATGGACCCCTATGTTCTGATACAATACAAAAGCCAAGAGCAGAGGAGCAGTGTTGCTAAGGGCCAAGGCAGAAATCCAATATGGAATGAGAAATTTATGTTTAGAGTAGAACACCCTGGATCAGGCAACAAGTACAAGCTCATCCTCAAAATCATGGACAAGGACACCTTATCTAGGGATGACTTTGTTGGACAAGCCATAATATATGTAGAGGATTTATTGGCACAAGGGGTAGAGAATGGAGGAGCTAAGCTACAGCCTCTCAAGTATAGAGTGGTTCGTGAAAACCAGTCTTATTGTGGTGAAATTACTGTTGGTATCACTTTCACCCCAAAGGTGGAAGACAAATTTATTGAAGAAGAGATAGGAGGATGGAAAGACAGTGACTACTATCTGCCGTAG 474 0.4241 MAIGFMEVQLLKAKGLHNTDIFGRMDPYVLIQYKSQEQRSSVAKGQGRNPIWNEKFMFRVEHPGSGNKYKLILKIMDKDTLSRDDFVGQAIIYVEDLLAQGVENGGAKLQPLKYRVVRENQSYCGEITVGITFTPKVEDKFIEEEIGGWKDSDYYLP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00036 157 PANTHER C2 DOMAIN-CONTAINING 3 137 - -
Sebi499g00036 157 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Sebi499g00036 157 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Sebi499g00036 157 Gene3D C2 domain 2 136 IPR035892 -
Sebi499g00036 157 Pfam C2 domain 6 104 IPR000008 -
Sebi499g00036 157 SMART C2_3c 5 106 IPR000008 -
Sebi499g00036 157 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00036 Sebi-Chr499 710785 712451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00036 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 7.97e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00036 - - gmx:100791344 256.914