Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00028 ATGGTTAAAGGACGCCAAGGAGAGCGCGTTAGATTATACCGCTTGTCTATCAAGAGAAAAAGGAAGGAAACATCGAGACAAGTGTGTCTGCTTTACGTTAGAGGTTCAATTCTTGGATACAAGAGATCCAAGTCAAATCAATACCCAAACACCTCTCTTATCCAGGTTGAGGGAGTAAACTCCAAGGAAGAGGTCTCATGGTACAGTGGGAAGCGTATGGCATACATTTACAAAGCCAAGGTAAAGAAGAATGGAACTCATTATCGCTGCATTTGGGGTAAGGTTATCAGGCCTCATGGTAACAGTGGTATAGTCCGTGCTAAGTTCAAGTCGAATCTGCCACCAAAATCAATGGGAGCAAGAGTTAGAGTCTTTATGTATCCAAGCAACATATGA 396 0.4268 MVKGRQGERVRLYRLSIKRKRKETSRQVCLLYVRGSILGYKRSKSNQYPNTSLIQVEGVNSKEEVSWYSGKRMAYIYKAKVKKNGTHYRCIWGKVIRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00028 131 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 131 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00028 131 ProSitePatterns Ribosomal protein L35Ae signature. 93 114 IPR018266 GO:0003735|GO:0005840|GO:0006412
Sebi499g00028 131 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 33 125 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00028 131 FunFam 60S ribosomal protein L35a 15 131 - -
Sebi499g00028 131 Gene3D translation elongation factor selb, chain A, domain 4 25 131 IPR038661 -
Sebi499g00028 131 Pfam Ribosomal protein L35Ae 31 125 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00028 131 SUPERFAMILY Translation proteins 31 125 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00028 Sebi-Chr499 540178 541332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00028 1 131 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 77.099 1.12e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00028 K02917 - cave:132162619 214.927