Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00025 ATGCTATACTTTTTCTTCTTTTGTGTTAGACTTTACTTGAGGGGTACAATCCTTGGATACAAAAGATTCGAATCAAACCAGTACCCAATCACATCTCTGGCCCAAATCGACGGAGTGAACCCTACAGAAGAGGTGTCATGGTATGCTGGAAAACGAATGACATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCATCATATGGGGTAAGGTTATAAGGCCCCACGGAAGCAGTGGTATTGTTCGTGCAAAATTCAAGTCAAATATTCCTCCCAAATCAATGGGAGCACAGGTAAGGGTATTTATATATCCAAGTAACCTATGA 336 0.4137 MLYFFFFCVRLYLRGTILGYKRFESNQYPITSLAQIDGVNPTEEVSWYAGKRMTYIYKAKVKKNGTHYRIIWGKVIRPHGSSGIVRAKFKSNIPPKSMGAQVRVFIYPSNL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00025 111 ProSitePatterns Ribosomal protein L35Ae signature. 73 94 IPR018266 GO:0003735|GO:0005840|GO:0006412
Sebi499g00025 111 FunFam 60S ribosomal protein L35a 7 111 - -
Sebi499g00025 111 Pfam Ribosomal protein L35Ae 11 105 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00025 111 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 13 105 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00025 111 SUPERFAMILY Translation proteins 11 105 IPR009000 -
Sebi499g00025 111 PANTHER 60S RIBOSOMAL PROTEIN L35A 9 110 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sebi499g00025 111 Gene3D translation elongation factor selb, chain A, domain 4 8 111 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00025 Sebi-Chr499 501914 502479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00025 9 111 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 78.641 1.80e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00025 K02917 - cave:132162619 185.267