Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi499g00015 ATGAGTTTTGTTTTTCGAGGAACAAGAGCAGATATAGAAAATGGATTTCCCGGATTTACGCCTGAGCGGCGTGCATTGCGTGTTCATGGAGCTGGAGCACGTCCAAGTAATTCCAATTCACTTACTTTTCTTGTCACAGTTCTTCTGTTATTCATGATACTGAACTCCCACCAGATGTCACCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGTTAAGGATGTATGCAACATGTCAACAGCTACAAGCTCAGGCCCAAGCTCATGCGGCAGCAGCAAGTGGGCTTCTTGGTCACACTGTGCTACGGTTGCATATGCCACCATCAATAGCACTTGCAACTAGGGGGCGCCTGCAAGGCCTCAGACTTCAACTCGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACATTAAGAGCTCTGGATTCAGATAATGTTCCTACTACACCTTCTATGACTGAGGAAGAGATAAACTCTCTTCCTGTCCATAAATACAAGGTTTCTGGTCCACAAAATAGTGGATCCTCAATGCAACTGGCTTCGTCCTCCACTCCTGGCGAGAAGAAGCAAGATAGTTCTAGTGCAGTTGGGAGCATGAAAGCTTCCGATGATGAGCTGACTTGCAGTGTATGCTTGGAGCAAGTAAATGTTGGAGATATGCTTTGTAGCTTGCCCTGCTTGCACCAGTTTCATGTCAATTGCATTGATCCCTGGCTAAGGCAACAAGGACATGCCCTGTCTGTAAATTCAGAGCAGGGTCTGGGTGGCATGAAAGTGGACAAAATGATATCGCGGACATGGTTTGATGAATAG 834 0.4568 MSFVFRGTRADIENGFPGFTPERRALRVHGAGARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTVLRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMTEEEINSLPVHKYKVSGPQNSGSSMQLASSSTPGEKKQDSSSAVGSMKASDDELTCSVCLEQVNVGDMLCSLPCLHQFHVNCIDPWLRQQGHALSVNSEQGLGGMKVDKMISRTWFDE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi499g00015 277 MobiDBLite consensus disorder prediction 151 205 - -
Sebi499g00015 277 Pfam Ring finger domain 214 249 IPR001841 -
Sebi499g00015 277 PANTHER TARGET OF ERK KINASE MPK-1 1 250 - -
Sebi499g00015 277 MobiDBLite consensus disorder prediction 172 205 - -
Sebi499g00015 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 254 IPR013083 -
Sebi499g00015 277 CDD RING-H2_PA-TM-RING 214 251 - -
Sebi499g00015 277 SUPERFAMILY RING/U-box 210 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi499g00015 Sebi-Chr499 197575 200560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi499g00015 1 250 C3H Transcription Factor Family AT3G55530 77.689 9.62e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi499g00015 K16283 - gmx:100777936 400.593