LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi498g00014	ATGCAGTGGTTAACTGGGTTTAAAGGTTTGGTTAACGTAAGCCATATCTGGGTTAAATGGACGTTTGAAAGGACCGAGCTTATAATCAGCAAGGCCATCATTGTGAAGTGCAACCCAATGTTACTGGTTGTCTGCTATGTTGACTGGAAAATAGTAATAGGTAATGCAGAGTTCCATTCTCCCCTGTTGTCTTCTTCGCGTTCGTCTTCGAAATTAGAGATCTCAAGAGGACCTGATTACAAGGAACAGAGCGCAGACGGTGAACACATGTCATTATATTCAGATGATTCATATGAAAGTGGTGGTGATGAACATAATGATTATGTTGATAGTGATCATTGTGACAATGATGAATCAGATAGCGATGACCGTCTTCATGATGAAGAGGATGATGGATTGGGGAATGAACCTTGGGAGATGGGTCACATTGAAGACTTTACCAACATTGATACGGTTGAAGACATCAAATTACTGGATTTTGACCGCTTGGGTCCACTTGAATTAAGCAAATTTGATTTTCCAAGTGTTGAGATAGCATATAAATTTTATGTTAGGTATGCTAGAGTAAAAGGCTTTGGGGTTCGTAAAAGCAACAAGCTTAAAAACAAGGAAGGAGTTGTAACAGGTCAAACTTTTGTTTGCAACAGAGAAGGTGAAAGAGAGGACAGAGGGTTGAGAGTAGAAGAGCGAAAGCGAAAGGAAAAGGCCCTAACTAGGTGTGGGTGTAAGGCGATGTTTAGAGTCCATGTTGATGTTTACAGCGGTCGATGGCAAGCACGAGGGTTTGAAAAGATTGGCTTCCGAAAGCAGGACATTTATAATCAAATCGGGCGACAAAGACGCCTAAAAGGTTCTGATGGCAGTTGTGCGCTTAATTACCTTAATAATCTACAGTTCAAGGAAACGATGAAGGGGAAATTCCCATCTTCTATCATCACTGATGGAGATATCGCGATGAGGAATGCCATTAAACGGTTGTATCTTTATGCCATGCGATATCGAGAAGCTGAATTCGACTTTGCGTCCACATATGGTGAACCGGTTTTGCAGACAAATTTTCATGCATTGGAGAAGTCAGCTGCGAATGTTCTAACTCGGGACCTGTTTTACTTATTTCAACCTGTTTTGGTGAAATCATCTGTCATGTGGACCAAGGGTGCAAAGTCTGCAATCCAAGGTATTGTGTCTGCTAATCCATGTGTGTGGGACATTGGATTATTGTCAAGATATGTTTCACTGCTAGATATATACATGCAATTGGCAAGGGTTGGATCTAAACGGCTGCATCGTTACAACTCCCTCAAAGAAAAGGCTCTAGCTGAACATGCTGCCATTAATGACAACAATGAGGAAAGTAGTGATGGTGATGGACCGGGTGAGGGACCGTCCATGCAGGTTGGGCATGGATGCTTAAATGATCCACCAGTAGTTCGAAGTAAAGGAAGCAGAAATTTGCATGTATCCAAGACCATATTGAGAAGTAAGCGTCCTAGGAAGTGTCGCTTGTGCAATGTGGTTGGGCATAATAGGGCAACATGTCCATTTCGAACACAACTAAATGAAATGTATGGTGGATCTACTGCAATGATTCCAGATAATGGTTCATTCTCAAATGACGACGTTCATGCTGGTGTTGGTGCAACATGGGAAGAAAATGGTGATGATGTTATTCTATCCTCAAATAGACGTTTTGTACGTCGTCGCCATCATTCACATATTCACAGGTGA	1728	0.4184	MQWLTGFKGLVNVSHIWVKWTFERTELIISKAIIVKCNPMLLVVCYVDWKIVIGNAEFHSPLLSSSRSSSKLEISRGPDYKEQSADGEHMSLYSDDSYESGGDEHNDYVDSDHCDNDESDSDDRLHDEEDDGLGNEPWEMGHIEDFTNIDTVEDIKLLDFDRLGPLELSKFDFPSVEIAYKFYVRYARVKGFGVRKSNKLKNKEGVVTGQTFVCNREGEREDRGLRVEERKRKEKALTRCGCKAMFRVHVDVYSGRWQARGFEKIGFRKQDIYNQIGRQRRLKGSDGSCALNYLNNLQFKETMKGKFPSSIITDGDIAMRNAIKRLYLYAMRYREAEFDFASTYGEPVLQTNFHALEKSAANVLTRDLFYLFQPVLVKSSVMWTKGAKSAIQGIVSANPCVWDIGLLSRYVSLLDIYMQLARVGSKRLHRYNSLKEKALAEHAAINDNNEESSDGDGPGEGPSMQVGHGCLNDPPVVRSKGSRNLHVSKTILRSKRPRKCRLCNVVGHNRATCPFRTQLNEMYGGSTAMIPDNGSFSNDDVHAGVGATWEENGDDVILSSNRRFVRRRHHSHIHR	575

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi498g00014	575	MobiDBLite	consensus disorder prediction	91	139	-	-
	Sebi498g00014	575	MobiDBLite	consensus disorder prediction	91	112	-	-
	Sebi498g00014	575	MobiDBLite	consensus disorder prediction	113	127	-	-
	Sebi498g00014	575	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	90	264	-	-
	Sebi498g00014	575	MobiDBLite	consensus disorder prediction	448	479	-	-
	Sebi498g00014	575	Pfam	FAR1 DNA-binding domain	181	264	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi498g00014	Sebi-Chr498	222349	227380	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi498g00014		FAR1	1.5e-14	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi498g00014	-		-	tpra:123886262	139.428