Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi497g00017 ATGCCTGAATGTCCAGAGAAAGGCAAGAGGATCAAGAGGGAAGTAGATGGTTCTTCTCAAAAGGGAAGAAGACACATGTTAGGCCCTCCTGGAATGCTTAATACCACCACCCCTTGTGCTGCATGTAAGTTGTTGAGAAGAAGGTGTGCTCAAGAATGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCCAGCAATGTCTCAAAGATGCTAATGGAGGTACCTGAGAGTCAGAGAGCAGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTAAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAATCTTTAATAGCTGAACTTAATGCTGTAAGGGCAGAAATACTTAAATACAAACTCAGGGAAGCTAACATGACACCTTCCTCATCTCATGTTTTACTTCCTTCCTCTGAGGATGTATCAATTGCTGCTCCACCTCCTCCAACACTACCAATGCCTCCTCTTCCTATAACTTCTTCTTCCATTTACACACAACAGGTGAATCCTACCAATTATAGCACAATTTCAAGTGAGAATAGTTCCTATTTTGGTTAA 624 0.4199 MPECPEKGKRIKREVDGSSQKGRRHMLGPPGMLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLIAELNAVRAEILKYKLREANMTPSSSHVLLPSSEDVSIAAPPPPTLPMPPLPITSSSIYTQQVNPTNYSTISSENSSYFG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi497g00017 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 157 - -
Sebi497g00017 207 MobiDBLite consensus disorder prediction 1 21 - -
Sebi497g00017 207 Pfam Lateral organ boundaries (LOB) domain 38 134 IPR004883 -
Sebi497g00017 207 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Sebi497g00017 207 MobiDBLite consensus disorder prediction 1 30 - -
Sebi497g00017 207 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi497g00017 Sebi-Chr497 295273 296214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi497g00017 23 207 AS2 family AT2G40470 71.429 2.02e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi497g00017 LOB 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi497g00017 - - ccaj:109797870 308.916