Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00048 ATGAATGATGTGAGGACTATTTTAGAAGAGGTACAAAAACTGGAAGAAAAAACTGAAGAAAACAATAAGTGTTACCGTGTGCCTTTCCACTACTTCCTATCAAAAGAAGTAGCAAGTGTGACTGAGAAAATGATGAAGCTAAACAACTACAAATTTGAGCAATTTTCTAGGCGCACTGAACTTCCTGGCATGCAATACTTTTCATCCAAAAACTTTGTGTATTCCAAGTCTACAGAGAATGCTTATAATGAACTCATGGAGGCACTGAAAGATGTAAACAATCATATGATTGGATTCCATGGGATGGGAGGATCCGGGAAAAGCACGTTGGTGAAAGAGGTGGGGAAGAAAGCTCAGGAGTTACACCTTTTTGACAAGGTTGTGATTGTTGTTGTCTCTCACAATCCATTACTGACAAAAATCCAAGGTGAAATTGCAGACAGTTTGGGTTTGATATTGAGGGAAGAGACAGTATATGGCAGGGCACAAAGACTATCATTGAGTTTACAGAATGAGAGGACTCTTGTGATCTTGGATGATGTATGGGAGAAGCTTGACTTTGAAGCTATTGGGATTCCACCCAATTGCATTGTCCTTCTAACTACTCGTGGTAGAGATATATGTGTTTCTATGAACTGCCAAGTTATAGTTGAGTTGTCTCTCTTAGATGAAGAGGAAGCTTGGACTTTGTTTAAACGGTGTGCAGACATCATTGATGACTCACCATATGCCTTGAAGTTAAAGAATGTGCCAAGGAAAATTGCTAAAAAATGTAGAAGATTGCCTATTGCAATTGTGACCATGGCAAGTATGTTAAGAGGAAAGAAATTTGAAGAGTGGGAGTTAGCATTGCTGAGATTGGAGGAATCACATAGAATAGATGTTGAAGAAGAGTTGAGCAGTTTTTATGCATGTATCAAGTTAAGTTATGATAATTTGACAAAGCAAGTATCCAAATCTCTCTTTTTATTATGCTCCATGTTTCCTGAAGATTGTGAGATTGGTGTGGAAGATTTGGTTCGGTACATGAAGGGACTTGGACCTGCTGCTGGAACTACAGGGACAATGGAGAAAGTGAGGAGAGAGATACAAGTGGCCATTTACTTTCTTAGAGATGCATATTTGTTGCAACCTAGTGGTCAAAGAGAATTTGTGAAAATGCATGATCTGGTCCGTGATGTGGCTTTGTGGATTGCATCCAAAGAGGGTAAAGCAATTAAGGTAGCTACTCAAACATTGGAAGTAGTAGATGAAGACATAAAAGATTTAGCTGCAATGTCCTTATGGGGCATGGAGAATCAGAATCTACCTTCTACTGATCAATTGCAGTGTTCAAAACTCAAGACTCTTCTACTTCATTCCACTGATGAATCTTCTTTGCAAGTGCCAAATGAGTATTTTGGAGGGATGCAAATGCTAGAAGTCTTGGGGATTGTAAAATATTACTATACATGGCGCAACTTGTATACATTGTGTAACTTAAGCTCATCATTGTCTACTTTGACCATACCAAAATCAATTGAGAGATTAACAATGTTGCGAAGTCTTTGTCTAAGAGGATATGAACTAGGTGATATCTCTTTATTGGCAAGCTTAACAGGACTTGAGATTCTTGATTTGCGTAGTTCATCTTTCAATGAATTGCCACATGGAATTGTAGCTTTGAAGAAGTTAAGACTACTTGACATATACACCTGCCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGAAAGTGTATGCAACTAGAGGAATTGTATATATGGAGAATTGAAGATGATTCTTTATATATTGTCTCATTGCCAAGGTTGCAGAGGTATGTTATAGTATGTGACAAGTTCAGGGAAAACTGTAGATTTCTTATAGATGCTTATCTAGAAGACCATGTGCCATCAAGAGCTTTATGCATAGACCGGTTTGATGCCTCTGCTTTGATTCATGAATCATCATCAATCAAAGATTTGTTTCTGAGGGCAGAGCACCTTTACTTGGGGCATCTTCAAGGAGGTTGCAAAAATATCATCCCACAAATGGATCAAGGAGGCATGACTGAGTTGATTGGGCTAATACTTGAGTCTTGTTCTGAGATAGAGTGCCTCATTGATACTACTTCACATACCAATTTGCCAGCATTTTTTGAGTTGGTTACCCTAAAGTTGATATGGATGGATGGTCTTAAAGAAGTTATCTGTGATCCAACTTCCCAATGTTGTCTTGAAAAATTAGAAGACCTACAAATAGAGTATTGTGTACAATTGAATAGCATATCTTTTCCAAGGAAATCAAATATGTGCAATCTTAAGATCCTTAGATTACAGTGGTGCCCAATGCTAACATCATCACTCTTCACCCCTGCCATTGCTCGAAGCTTAGTTCTACTAGAGGAATTGAAATTATTTGATTGCAGCAAGTTGAAGCATATCATAGCAGAAGAACAAGAGGAAGATGGAAATTCTAGTAATCCAAGTCCTACCTTGAAAGTGTTCCCAAATCTAAGGATTCTTCATGTGCATGGATGTCATAGGTTAGAATCAATCTTTCCTGTCACATTTTCTCAAAGTCTAGAGAAATTGGAGAAGATAGCTATATGGTACAACTTTGGATTAAAGTATGTATTTGGCACACTCAATGACTACAAGCTCAGTGAGAGCGAGGCTAAACCCAACATCAACCTCCTTGCTTTAAGAACCATCTCACTTGTATCATTATCAAATTTGATTGACATTTGCCCCAGATATTGTCATCCAAGATCACCCAACTTGAAAGAGATAGAATACAGAGATTGTCCCCACCTGTCAACCAATGCAATGTGCAAGACTTTGATTAGTTCAGATATGCAACAAGGTCTTACACCTACAGAGGAAAAAATATTATTTCCTAAAAATGGAGAATCAATCCTAGCTTTGGAACGTCTTAGTATTGACCATTCCATGGTGGAAGGTATTTTCCAACTGCAAGTTGAAGGACAACAACCCTTGAACTCAAACTTGTCTCACTTATGTTTAAAGGATTTACCTGATTTGAGGCTCATTTGGAAGGGCCCAAAAGATCTCCTCAACCTTCACAGACTCAAGAGTCTAGTGCTAGTGGGATGCAAAAACTTGGAAACCATCTTCTACCCCACTATTGTTGGAAGCTTAGCAGAATTGACTGAACTGGTTATAAGCAAGTGTCAACAATTGGAGCAGATCATTAACTCAGATCACACAGATCAAGTTGGAAACCCATCTTCTCGTTCCAAATCAGTGTGCTTCCCTCTATTGTCCATTGTTCATGTCTTTCAGTGCAATAATTTGAGATGCCTTTTCTCTCATTCATTGCCTTCTTCATTTCCTGAGCTAGAATTTATTACAATAGAGGAGTGTTCCAAAATAGAACATATTTTCTATTTTAATCGCCATGTTGTTACATCTAATTATGATGATAAAGGTCAAGGACAAGGAGTAGGAAGGGTACCTGATGAAGACACACAACCATTAGTGCTTCCAAAATTGAGAGAGGTAAAACTTGTAAGTTTGCCTAACTTCACTGAATTTTTCCAAGGGCCTTATAAGTTGCAGCAGAATGTGAAGCATTACACAGTGAGGCATTGTCCTAAATATACCTCTGCTTGGCTGCATACTGATAACCAGGAGAAGGGTCAAATTTCCTCCACACAATCACAAACAATTGGGAAAGTCTCAAGTATAGGATTAGGATCAGATGCTTGTGTTGCTACCACCAGTGGTAGTGTCAGTGATCCTCAGATACAAGAGAGGGTGAGCAACTTGGAAAAATACTTAGAATCTGAGAGACAAAGACGAAGGTTGATGGAAACTGATTTGGAATCTGAGCGACAAAGGCAAAGGTTGATGGAGTTAGATTTGCAGGTTGAGAGGGAAAGACGAAGATTGATAGAATTGAAGCTGGAAGCTGAACAGGAAAGACGACGAATCATGGAAGAATCACTGTTTTCTGTCTTTCATCAAATGCTTGGAAGGGTCCCTCAACAGTTTGTTGGCTTGCTTTCCCAGAATCCTCTGGCACCAAATGAAGAAAGTGGAGATCAAGACATTCATGATGTATTGATACAATCCTCTTGA 4083 0.3872 MNDVRTILEEVQKLEEKTEENNKCYRVPFHYFLSKEVASVTEKMMKLNNYKFEQFSRRTELPGMQYFSSKNFVYSKSTENAYNELMEALKDVNNHMIGFHGMGGSGKSTLVKEVGKKAQELHLFDKVVIVVVSHNPLLTKIQGEIADSLGLILREETVYGRAQRLSLSLQNERTLVILDDVWEKLDFEAIGIPPNCIVLLTTRGRDICVSMNCQVIVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCRRLPIAIVTMASMLRGKKFEEWELALLRLEESHRIDVEEELSSFYACIKLSYDNLTKQVSKSLFLLCSMFPEDCEIGVEDLVRYMKGLGPAAGTTGTMEKVRREIQVAIYFLRDAYLLQPSGQREFVKMHDLVRDVALWIASKEGKAIKVATQTLEVVDEDIKDLAAMSLWGMENQNLPSTDQLQCSKLKTLLLHSTDESSLQVPNEYFGGMQMLEVLGIVKYYYTWRNLYTLCNLSSSLSTLTIPKSIERLTMLRSLCLRGYELGDISLLASLTGLEILDLRSSSFNELPHGIVALKKLRLLDIYTCRIKKNNPYEVIRKCMQLEELYIWRIEDDSLYIVSLPRLQRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDRFDASALIHESSSIKDLFLRAEHLYLGHLQGGCKNIIPQMDQGGMTELIGLILESCSEIECLIDTTSHTNLPAFFELVTLKLIWMDGLKEVICDPTSQCCLEKLEDLQIEYCVQLNSISFPRKSNMCNLKILRLQWCPMLTSSLFTPAIARSLVLLEELKLFDCSKLKHIIAEEQEEDGNSSNPSPTLKVFPNLRILHVHGCHRLESIFPVTFSQSLEKLEKIAIWYNFGLKYVFGTLNDYKLSESEAKPNINLLALRTISLVSLSNLIDICPRYCHPRSPNLKEIEYRDCPHLSTNAMCKTLISSDMQQGLTPTEEKILFPKNGESILALERLSIDHSMVEGIFQLQVEGQQPLNSNLSHLCLKDLPDLRLIWKGPKDLLNLHRLKSLVLVGCKNLETIFYPTIVGSLAELTELVISKCQQLEQIINSDHTDQVGNPSSRSKSVCFPLLSIVHVFQCNNLRCLFSHSLPSSFPELEFITIEECSKIEHIFYFNRHVVTSNYDDKGQGQGVGRVPDEDTQPLVLPKLREVKLVSLPNFTEFFQGPYKLQQNVKHYTVRHCPKYTSAWLHTDNQEKGQISSTQSQTIGKVSSIGLGSDACVATTSGSVSDPQIQERVSNLEKYLESERQRRRLMETDLESERQRQRLMELDLQVERERRRLIELKLEAEQERRRIMEESLFSVFHQMLGRVPQQFVGLLSQNPLAPNEESGDQDIHDVLIQSS 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00048 1360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 325 IPR027417 -
Sebi496g00048 1360 Gene3D - 64 218 IPR027417 -
Sebi496g00048 1360 Gene3D - 310 396 IPR036388 -
Sebi496g00048 1360 PRINTS Disease resistance protein signature 96 111 - -
Sebi496g00048 1360 PRINTS Disease resistance protein signature 168 182 - -
Sebi496g00048 1360 PRINTS Disease resistance protein signature 530 546 - -
Sebi496g00048 1360 PRINTS Disease resistance protein signature 258 272 - -
Sebi496g00048 1360 Coils Coil 1 21 - -
Sebi496g00048 1360 SUPERFAMILY RNI-like 968 1127 - -
Sebi496g00048 1360 SMART AAA_5 93 221 IPR003593 GO:0016887
Sebi496g00048 1360 Gene3D - 221 309 IPR042197 -
Sebi496g00048 1360 MobiDBLite consensus disorder prediction 1339 1360 - -
Sebi496g00048 1360 Pfam NB-ARC domain 78 312 IPR002182 GO:0043531
Sebi496g00048 1360 Gene3D Ribonuclease Inhibitor 819 951 IPR032675 -
Sebi496g00048 1360 Gene3D Ribonuclease Inhibitor 958 1212 IPR032675 -
Sebi496g00048 1360 SUPERFAMILY L domain-like 386 934 - -
Sebi496g00048 1360 Coils Coil 75 95 - -
Sebi496g00048 1360 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 898 1129 - -
Sebi496g00048 1360 Coils Coil 1261 1315 - -
Sebi496g00048 1360 Gene3D Ribonuclease Inhibitor 421 818 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00048 Sebi-Chr496 586458 591283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00048 82 414 WRKY Transcription Factor Family AT5G45050 26.912 6.82e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00048 - - mtr:11431977 2006.49