Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00042 ATGTCTCCTGCCACCTCACCCACGGCGTCGCACAGGCTCGTCAGCTTCAGCCGTCACACGCTTGCGTTGCGCCATCCACCACGGTCGTATGCGCCGCCGATTAAGAAGTACAGGTCGATGACGGACATAATGGAGAGGGCGCGCTATGTTGTGGTGGAACATGAGGATTATAGCGACCTGACCTGCGACCAATGTCGATCAGGTGAGAGGGTGGAGGAGTTGCTTTTGTGTGACAAAGGCTTCCACATGAAATGTGTGAGGCCCATCGTCGTGAGGGTACCGAATGGATCTTGGCTTTGCCCTAAGTGTTCGGGAGGGAAGAGAGTTTCTCTCAAAAGAAGATAA 345 0.542 MSPATSPTASHRLVSFSRHTLALRHPPRSYAPPIKKYRSMTDIMERARYVVVEHEDYSDLTCDQCRSGERVEELLLCDKGFHMKCVRPIVVRVPNGSWLCPKCSGGKRVSLKRR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00042 114 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 113 IPR013083 -
Sebi496g00042 114 SUPERFAMILY FYVE/PHD zinc finger 26 104 IPR011011 -
Sebi496g00042 114 SMART PHD_3 61 104 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00042 Sebi-Chr496 491816 492279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00042 59 111 C2H2 Transcription Factor Family AT3G01460 38.596 1.09e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00042 K24406 - qsa:O6P43_023354 143.28