Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00041 ATGGCTCCTGCCACCTCATCCGTGGCGTCGCACAGGCTCATCGGCTTCAGCCGTCGCACGTTTGCACTGCGCCATCCACAACGACCATATTCGCCGCCGATTAAGAAGTACAGGTCGATGACAAACATAATGGAGAGGGCGCGCTATGCTGTGGTGGAACGTGAGGATTATAGCGACCTGACCTACGACCAATGTCGATCCGGTGAGAGGGCGAAGTTGCTGCTTTTGTGCGATAAATGCGACAAAGGCTTCCACATGAAATGTGTGAGGCCCATCATCGTGAGGGTACCGAGTGGATCTTGGCTTTGCCCTAAGTGTTCGAGAGGGAAGAGAGTGAAAAAGATTGACTTCTACCGGTTTCCTTCATTTTCTTCGTGCTTTCTCGGGAAAGTTTCGGATTTAGCGGGAGGTAAAGTCACATGCTTGGTGGCCTCTATTAGTATTGGAGTCTTAACATATTTTGTCATGGAGAATACTGGAGGTGGTGCCCTTTTGAGGAATAGAAGGTTGGAAAGCTTCTTGGATACAAGCTCTGGCCAAAGAGTAGAAGAAACTCCAAGAATTTTAGTGAAGGATGAATCAGGACAAAGGCCAAGGAAGGATGTCTATACAGATGATGATGGATGGGTTTTAACAATCATATCTTGGATCAGAATTGTCACATGTTTTGTGTCTATGATGGTCACAACATTCATATGGGCATTGATCATGGTTTTGCTTATTCCATGGCCTTATGAGAGGATTAGACAGGGAAACATTTATGGGCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGTAATCCTATAAAGATTGAAGGTGCTGAGTACTGTAACGAGAGGGCCATTTACATCAGCAATCATGCATCTCCAATTGACATATTTCTTATAATGTGGTTGACTCCTACAGGCACAGTTGGCATTGCCAAGAAGGAGATAATATGGTATCCTCTATTTGGGCAACTTTATATTTTGGCCAACCATCTTCGTATAGACCGGTCTAACCCAGCTGCAGCTATTGAATCCATGAAAGAGGCAGCTCGTGCAGTTGTGAAAAACAATCTGTCCCTTATAATTTTTCCTGAAGGTACCAGGTCCAAGAATGGACGGCTACTTCCTTTCAAAAAAGGTTTTGTTCATTTAGCACTGCAATCGCGCCTTCCAATTGTTCCAATGGTCCTGACAGGCACTCATCAAGCATGGAGGAAAGGCAGTTTGCATGTCAGACCAACACCTCTTACTGTCAAGTATCTTCCTCCTATAAGCACTGAAAATTGGAAGGCTGATAACATTGATGAGTATGTCAAAATGGTGCACAACTTGTATGCTGAACACCTTCCTGAGACTCAGAGACCAATGCCTTGA 1365 0.4484 MAPATSSVASHRLIGFSRRTFALRHPQRPYSPPIKKYRSMTNIMERARYAVVEREDYSDLTYDQCRSGERAKLLLLCDKCDKGFHMKCVRPIIVRVPSGSWLCPKCSRGKRVKKIDFYRFPSFSSCFLGKVSDLAGGKVTCLVASISIGVLTYFVMENTGGGALLRNRRLESFLDTSSGQRVEETPRILVKDESGQRPRKDVYTDDDGWVLTIISWIRIVTCFVSMMVTTFIWALIMVLLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYCNERAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYILANHLRIDRSNPAAAIESMKEAARAVVKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLALQSRLPIVPMVLTGTHQAWRKGSLHVRPTPLTVKYLPPISTENWKADNIDEYVKMVHNLYAEHLPETQRPMP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00041 454 Pfam Acyltransferase 270 394 IPR002123 GO:0016746
Sebi496g00041 454 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 216 451 - -
Sebi496g00041 454 CDD PHD_BAZ2A_like 65 106 - -
Sebi496g00041 454 ProSiteProfiles Zinc finger PHD-type profile. 59 109 IPR019787 -
Sebi496g00041 454 SMART plsc_2 282 397 IPR002123 GO:0016746
Sebi496g00041 454 Pfam PHD-finger 65 108 IPR019787 -
Sebi496g00041 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 117 IPR013083 -
Sebi496g00041 454 CDD LPLAT_AGPAT-like 260 432 - -
Sebi496g00041 454 NCBIfam 1-acylglycerol-3-phosphate O-acyltransferase 279 394 IPR004552 GO:0003841|GO:0008654|GO:0016020
Sebi496g00041 454 SMART PHD_3 65 107 IPR001965 -
Sebi496g00041 454 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 213 449 - -
Sebi496g00041 454 SUPERFAMILY FYVE/PHD zinc finger 26 108 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00041 Sebi-Chr496 476966 485302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00041 126 405 Acyl Lipid Metabolism Gene Families AT4G30580 27.703 7.72e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sebi496g00041 Acyltransferase 3.6e-29 CL0228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00041 - - pcin:129318885 513.457