Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00037 ATGCAAAACGGTAACCTCCAAGACGCGCTCTTGCGTCGCAAGTGCCCTGAATTCTTCGATTGGAACAAGCGCTTCGCCATTCCGTTGGACATAGCTAAAGGAATTCACTACCTTCACTCTTGTGACCCTCCAATTATCCATGGAGACATAAAACCTAGTAACATCTTGCTGGATCGTGATTTCTCAGTGAAAATTGGGGATTTTGGACTTGCCAGTTTGAAATTGGAACCACCCCAGGTTGAATTGGACATTTTAAAGGGTAATTTGGGTATGGAGCAATCCTCTGCTTCGCCTAAGACAATGGCGATAACCGCCTCGCCGGAGATGGGTTTGGCCATTGCTGCATCGCCGAGGTTTGATAAGGCTAGTGTGCAGAGTGAGAAGGATGTTGATGTTGTTGGGGGTTTTAAGAGGAATGGTAAAGGGCTAAAGAGTAATTCAGTGAGGGATTGGTGGTGGAAACATAACAATGAGGTTGTGGCTTCGGGTTCAAGTTCAACTCCGGTTGGTGAAGCTAAGAAGGTTAAGGATTATGTGATGGAGTGGCTTGGGAGGGAGGTGAATAAGGAAGGGACCAATAAGAGTGAATTGGTAGGAGGGAAACCAGAGAAGAAGAGCAAGAAGCAAGAATTGGAATGGTGGGAATCCATGGATGAGGAAAATGTTGGTGAGGTTTTGACGAAGCAACCCCATCATACGAAGGGATCTAACTCACTGTCTCCTCCCGAAGTCTCTGGCTAA 741 0.4656 MQNGNLQDALLRRKCPEFFDWNKRFAIPLDIAKGIHYLHSCDPPIIHGDIKPSNILLDRDFSVKIGDFGLASLKLEPPQVELDILKGNLGMEQSSASPKTMAITASPEMGLAIAASPRFDKASVQSEKDVDVVGGFKRNGKGLKSNSVRDWWWKHNNEVVASGSSSTPVGEAKKVKDYVMEWLGREVNKEGTNKSELVGGKPEKKSKKQELEWWESMDEENVGEVLTKQPHHTKGSNSLSPPEVSG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00037 246 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Sebi496g00037 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Sebi496g00037 246 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Sebi496g00037 246 Pfam Protein kinase domain 2 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi496g00037 246 ProSiteProfiles Protein kinase domain profile. 1 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi496g00037 246 MobiDBLite consensus disorder prediction 230 246 - -
Sebi496g00037 246 MobiDBLite consensus disorder prediction 189 227 - -
Sebi496g00037 246 PANTHER OS07G0586332 PROTEIN 1 225 IPR044576 -
Sebi496g00037 246 MobiDBLite consensus disorder prediction 189 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00037 Sebi-Chr496 442379 443231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00037 1 80 Receptor kinase-like Gene Family AT5G35380 49.383 3.69e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sebi496g00037 Pkinase 3.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00037 - - lja:Lj2g3v0473820.1 285.419