Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00031 ATGGGTTGTTGTCAGAGTAGAAAAAGATCAGAGCCAGAACACATTGGTTACAATCATACTAGGGGTGCTGGTGTGCACAATCACAAGAACCATGAACCCTTTGTCAACCCTTCTCATCAACCTTACCAATTACCTGAGAAACATGCTCCTCCTGCTGCAGCACCTAAAACACCTTGGAAGCCTGCCCCAAGCCCCAAACGTGTTCACAAGTCAGATGCTCATACAATTCTTGGGAAACCATTTGAGGATGTTAGGGAATTCTATACACTTGGGAAAGAATTGGGGAGAGGTCAATTTGGGGTGACTTATCTCTGCACTGAGAATTCAACTGGTTTGCAATATGCTTGCAAGTCCATTTCAAAGAGGAAGCTTACTAGCAAATCTGATAAGGAGGATATGAAGAGGGAGATTCAAATTATGCAGCATTTGAGTGGACAACCAAATATTGTTGAATTTAAAGGTGCTTATGAGGATAAACAATCAGTTCATGTTGTTATGGAGCTTTGTGCAGGTGGTGAGCTTTTTGATAGGATTATTGCAAAGGGGCACTATAGTGAAAGAGCTGCAGCTTCAATATGTAGACAAATTGTTAATGTTGTCCATATTTGCCATTTTATGGGTGTGATGCATAGGGATCTCAAGCCAGAGAATTTCTTATTATCCAGTAAGGATGACAAGGCACTTCTCAAGGCCACAGATTTTGGCTTGTCTGTCTTCATTGAAGAAGGAAAGGTGTATCGGGATATAGTTGGCAGTGCTTATTATGTTGCTCCAGAAGTTCTGCGTCGTAAATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATGTTGTATATCTTACTTAGTGGTGTGCCTCCATTTTGGGCAGAGTCAGAAAAGGGAATATTTGATGCCATATTGGAAGGTCAAATTGATTTTCATAGTCATCCATGGCCAACCATATCAACCAGTGCTAAGGACCTTATTCGTAAGATGCTTATACAGGACCCAAAGAAACGCATTACTGCCACTCAGGTTCTAGAGCACCCCTGGCTTAAAGAAGGTGGAAATGCTCCTGACAAGCCAATAGACAGCGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTGAAAAAACTTGCCCTTAAGGTCATTGCTGAAAATCTTTCTGAAGAAGAAATCCAAGGTTTGAAGGCAATGTTTATTACAAGAGATGAACTGGAAACAGCCATGAAGGAATATGGTATGGGTGATGAAGCCACAATAAGGGAAATTATATCCGAAGTTGACACAGATAATGATGGTAGAATCAATTATGAAGAATTTTGTACAATGATGAGGAGTGGAACTCAACAACAAGGAGGCAAGTTATTCTAA 1368 0.4064 MGCCQSRKRSEPEHIGYNHTRGAGVHNHKNHEPFVNPSHQPYQLPEKHAPPAAAPKTPWKPAPSPKRVHKSDAHTILGKPFEDVREFYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLTSKSDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDDKALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRKYGKEIDIWSAGVMLYILLSGVPPFWAESEKGIFDAILEGQIDFHSHPWPTISTSAKDLIRKMLIQDPKKRITATQVLEHPWLKEGGNAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFITRDELETAMKEYGMGDEATIREIISEVDTDNDGRINYEEFCTMMRSGTQQQGGKLF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00031 455 CDD STKc_CAMK 87 345 - -
Sebi496g00031 455 Gene3D - 362 386 - -
Sebi496g00031 455 CDD EFh 398 444 IPR002048 GO:0005509
Sebi496g00031 455 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Sebi496g00031 455 Gene3D - 387 397 - -
Sebi496g00031 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sebi496g00031 455 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Sebi496g00031 455 Pfam Protein kinase domain 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi496g00031 455 SUPERFAMILY Protein kinase-like (PK-like) 72 367 IPR011009 -
Sebi496g00031 455 SUPERFAMILY EF-hand 384 453 IPR011992 -
Sebi496g00031 455 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Sebi496g00031 455 Gene3D Transferase(Phosphotransferase) domain 1 174 361 - -
Sebi496g00031 455 ProSiteProfiles Protein kinase domain profile. 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi496g00031 455 Gene3D - 398 453 - -
Sebi496g00031 455 MobiDBLite consensus disorder prediction 1 74 - -
Sebi496g00031 455 FunFam Calcium-dependent protein kinase 1 90 173 - -
Sebi496g00031 455 PANTHER SERINE/THREONINE-PROTEIN KINASE 83 444 - -
Sebi496g00031 455 SMART efh_1 418 446 IPR002048 GO:0005509
Sebi496g00031 455 Pfam EF-hand domain pair 397 444 IPR002048 GO:0005509
Sebi496g00031 455 FunFam calcium-dependent protein kinase 1 174 353 - -
Sebi496g00031 455 Gene3D Phosphorylase Kinase; domain 1 90 173 - -
Sebi496g00031 455 SMART serkin_6 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00031 Sebi-Chr496 357901 361844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00031 398 455 EF-hand Containing Proteins AT3G20410 72.881 1.44e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi496g00031 Pkinase 3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00031 K13412 - gmx:100794852 691.034