Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00016 ATGGAAGGTTCTTCCATTACCATTAACTTTCTTAAATCACAATGCAGTGTGGATTCAAGGAAGATCCTAAAAACAAAACGTGTTGTTAATGTTAATGATGTTATTCTTGACCAACCGGTTATTGGATTGCCAATGAGATTGCAAGAAAAGATTCAAGAAATGGAAGTTCGTGAGGTGAAGTTGGTGATCCAAAAAAAGCTCTTTAAGAGTGATCTGAACTCTAATAATGGGAGGTTCTCCATCCCAATACAACAAATTCAACATGATGCAAGGGATTTCCTTTTAGAGAGAGAGGAACACTATTTGACAGTACGTGAAGGTGAAGGGAAAATACAAAAGCTTGCTGGTATCTCAGTGTCTGTGTTGGATCCAAGTCTTAAACTTTACAATATGTGCTTCAAGAAATGGAAGATGGAGCACACACAGGTGCACAATATAACTAGTGGATGGAACAACCTTGTGAGAAATAATTCTTTGAAAGCCAATGTTACAGTGCAATTGTGGTCTTTCAGAAGCAACAACAATCGCCTGTGTTTTGCATTGGTCAAGATTTAA 555 0.3748 MEGSSITINFLKSQCSVDSRKILKTKRVVNVNDVILDQPVIGLPMRLQEKIQEMEVREVKLVIQKKLFKSDLNSNNGRFSIPIQQIQHDARDFLLEREEHYLTVREGEGKIQKLAGISVSVLDPSLKLYNMCFKKWKMEHTQVHNITSGWNNLVRNNSLKANVTVQLWSFRSNNNRLCFALVKI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00016 184 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 24 184 IPR005508 GO:0003677
Sebi496g00016 184 Gene3D - 52 181 IPR015300 -
Sebi496g00016 184 SUPERFAMILY DNA-binding pseudobarrel domain 62 177 IPR015300 -
Sebi496g00016 184 Pfam B3 domain-containing protein At2g31720-like 47 155 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00016 Sebi-Chr496 207841 208395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00016 47 181 B3 DNA Binding Superfamily AT1G05930 26.471 8.62e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00016 - - tpra:123920509 143.665