Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00009 ATGGGAAAGAGTACTCTGAAACCAATAAGATCTGAGCATGGGAGGGATAGAAGTCAAGTTGATGAGCTTGCTCACATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTCGGTGTTATTGGTGCCTTGGTGAAGGTTGATGACACAGAAGTTATAGCCTTCCTTCTTTCAACTGAGATAATTCCGCTGTGCCTGCGCACCATGGAAATCGGCAGCGAATTGTCAAAAACTGTTGCAACATTTATACTTCAAAGAATTGTGTTGGACGATATTGGTTTGGATTATGTTTGTGCTACAGCAGAGCGCTTTTTTGCAGTGGGTCGAGTTTTGGCGTGCATGATAGCAATTCTTGCTGAGCAACCTTCAACTCGTCTTTTGAAGCATATTATTCGATGTTATCTTCGTCTGTCAGATAATCGAAGGGCTTGCGATGCATTAAGAAGCTGTCTTCCGGATATGTTAAGAGATGCCACTTTCAGTAGTTGCCTTCATGAAGATCCAACGACTAGGAAGTGGCTACAACAGTTGCTTCACAATGTTGGAATGAATCGGCTTCCTTCACTACAAGCTGGAGGAGGATTTGATCATATGATGGTGTCGTGA 645 0.4264 MGKSTLKPIRSEHGRDRSQVDELAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVIAFLLSTEIIPLCLRTMEIGSELSKTVATFILQRIVLDDIGLDYVCATAERFFAVGRVLACMIAILAEQPSTRLLKHIIRCYLRLSDNRRACDALRSCLPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGMNRLPSLQAGGGFDHMMVS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00009 214 PANTHER UNCHARACTERIZED 24 197 IPR007216 GO:0006402|GO:0030014
Sebi496g00009 214 Gene3D - 11 198 IPR011989 -
Sebi496g00009 214 Pfam Cell differentiation family, Rcd1-like 24 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00009 Sebi-Chr496 120925 124176 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Sebi496g00009 Rcd1 1.9e-82 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00009 K12606 - pvy:116145240 351.288