Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00008 ATGGCGAATTTGCCCCAATCCTTCTCCATAACCGGCGCGTCGTTTGCAGCTGCTTCCGCCATTCCATCCAACAACGCCGCCAATCGCAAGATGGCTTCCGCGGAGCAACTTGTTCTCGAACTCAGCAACCCCGATCTTCGAGAAAACGCTCTTCTTGAACTTTCCAAGAAGAGAGAGTTGTTTCAGGATCTTGCACCATTGTTGTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCTGTTATTTCACCACCGAATCTTACTCCAGCACAATCAAATCGAGTATGCAATGCTCTTGCCCTGCTTCAGCAGATGACACTTTCACCATACCCCAAATACTATTCTTAA 369 0.458 MANLPQSFSITGASFAAASAIPSNNAANRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQQMTLSPYPKYYS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00008 122 PANTHER UNCHARACTERIZED 28 113 IPR007216 GO:0006402|GO:0030014
Sebi496g00008 122 Gene3D - 26 119 IPR011989 -
Sebi496g00008 122 Pfam Cell differentiation family, Rcd1-like 37 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00008 Sebi-Chr496 119069 120417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Sebi496g00008 Rcd1 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi496g00008 K12606 - ini:109178184 169.474