Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi496g00004 ATGATCCACAGATACAGTCGTCACCTTGTCCTTCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTCTTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCTCCTGCCTTGTTATACTTTGCAGCTTCTGGTGTTGGTCGCTTGGGTATTGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATCCACACGGAAGCATTTATTGGTCAGCCAAAAGTGAAATCTGCTGCTGCTGCTTGTCGCTCGGTCAACTCCTCTATTCAAATTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCCACCCGGTATATGATCAGTGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTCACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCGTGCCAAAGTTGTGCTGATGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCGAAGCTCTTGAGGCTATAAAGATTGCAGCTTCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTTGATGCATTGTCTGGACGGATTCGTGTTATCAAAATTAGAGGAAGGTCTATGCAATGTGAAGCTTGTGGAGAAAATGCAAAATTTACTCAGCAGTACTTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTATGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGTGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAGTAATTCTTAACAAGGAACCACATGTCCTTGTTGACGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTCCCCAATTCCCTGAACATTCCACTCTCAACTTTAGAGGCTAGGTTGCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGAAAGAGGTAGTGCACAATTGTATGTAGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTGCCTTGAGAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGGCTTGGGCTCACAATGTGGATCCTAACTTCCCTACATATTAG 1182 0.4382 MIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGRLGIVDHDKVELNNMHRQIIHTEAFIGQPKVKSAAAACRSVNSSIQIVEHEEALRTSNALEILSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCADGGVLGVVPGIIGCLEALEAIKIAASVGEPLSGRMLLFDALSGRIRVIKIRGRSMQCEACGENAKFTQQYFREFDYEKFTQTPLCVPPLKLNLLPSESRISSKEYSEVILNKEPHVLVDVRPAHHFKIVSLPNSLNIPLSTLEARLPEISSALKKEEEERGSAQLYVVCRRGNDSQRAVQCLEKMGFTSAKDIVGGLEAWAHNVDPNFPTY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi496g00004 393 CDD ThiF_MoeB_HesA_family 4 232 - -
Sebi496g00004 393 CDD RHOD_ThiF 273 393 - -
Sebi496g00004 393 FunFam Adenylyltransferase and sulfurtransferase MOCS3 1 247 - -
Sebi496g00004 393 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 3 360 IPR035985 GO:0008641
Sebi496g00004 393 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 1 393 IPR028885 GO:0002143|GO:0004792|GO:0005829
Sebi496g00004 393 Pfam Rhodanese-like domain 290 383 IPR001763 -
Sebi496g00004 393 Pfam ThiF family 5 240 IPR000594 -
Sebi496g00004 393 FunFam Adenylyltransferase and sulfurtransferase MOCS3 280 393 - -
Sebi496g00004 393 Gene3D - 1 249 - -
Sebi496g00004 393 Coils Coil 321 341 - -
Sebi496g00004 393 ProSiteProfiles Rhodanese domain profile. 293 391 IPR001763 -
Sebi496g00004 393 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 3 289 IPR045886 -
Sebi496g00004 393 SMART rhod_4 283 388 IPR001763 -
Sebi496g00004 393 Gene3D - 280 393 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi496g00004 Sebi-Chr496 60185 64384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi496g00004 43 393 Sulfurtransferasese or Rhodanese AT5G55130 72.269 0.0 542