Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi495g00023 ATGGTAGAAGGGACCATTGCCTACTATTTCAGAACTCCAGGCTGCTACACTGAAATGCTCTGCTTTGACCATTCTGGAGTGTCGAAGCTCCACTCTGCTATGCTATGCCGCTATAACAACCATGACTTCAAACCTGTGCAGCGACCTTTCTATGAACGGTGGAGGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCAGGAACGATTCCAGAGCAAAAATCTTTACTATAGATATGACATGGAGCCATTCAGGGTGAGGAGGAAAGCTTTTTGGTTGCTCTCTACTGTCACAAAACTCTTAAACGAATTCATTCCAAAACTCTCACATGATGCAGATGGCCTCATATTTCAGCATGAGAATGGATATCCTTGTGCCTTCTGTAGTGATCTTAATATGATGTCTGGTAAAAGAGACATTATACCTAGCCTAGCTCATAGAGGATCAATGTTACCTAGACTAGCTTATAGTCCAGGTACATTGGGTTGGGACGATCCTTATATACCACGCACTCATGAAGGCCTCTTAAAATGGAAATATGCTGATCTGAACTCAGTTGATTTTCTCTTTGAGATTGAAGATGATCGTCAGCTACTTTTTCTCTATGAGCGAGGAAAAAAGAAACTCATGGAAGGGTATAGGGTTGCATTTGAAGAAGGTTCAGACCCCTTGCTTTATTCCGGAAAGATCATTGAGTGTGCTTGGGATTCTGATAAACAAGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCAACTCCAAATGACTTTAATACTTATAAGAAGGTGATGAAAAGTATAAGGGACAATATCACCGAGGATATCCTGTTGAATGAAATAAATGAGATAATTCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGCCCATCATCACACTAACATGGCTAGGCGAAGATCAAATATGTCTACTGATGTCTGCCTGTGGCCATCATCCAAAGGGCCTGTGGTTATCCAGATGAAGGGTTAG 999 0.4164 MVEGTIAYYFRTPGCYTEMLCFDHSGVSKLHSAMLCRYNNHDFKPVQRPFYERWRMLEKEVIEPRNQERFQSKNLYYRYDMEPFRVRRKAFWLLSTVTKLLNEFIPKLSHDADGLIFQHENGYPCAFCSDLNMMSGKRDIIPSLAHRGSMLPRLAYSPGTLGWDDPYIPRTHEGLLKWKYADLNSVDFLFEIEDDRQLLFLYERGKKKLMEGYRVAFEEGSDPLLYSGKIIECAWDSDKQEWIFKRVRTDKSTPNDFNTYKKVMKSIRDNITEDILLNEINEIIRLPMYADRIRIDSKAHHHTNMARRRSNMSTDVCLWPSSKGPVVIQMKG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi495g00023 332 Gene3D DNA ligase/mRNA capping enzyme 35 132 - -
Sebi495g00023 332 FunFam mRNA-capping enzyme 201 294 - -
Sebi495g00023 332 Gene3D - 217 286 IPR012340 -
Sebi495g00023 332 SUPERFAMILY Nucleic acid-binding proteins 182 293 IPR012340 -
Sebi495g00023 332 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 45 121 - -
Sebi495g00023 332 Pfam mRNA capping enzyme, C-terminal domain 184 276 IPR013846 -
Sebi495g00023 332 Pfam mRNA capping enzyme, catalytic domain 46 121 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sebi495g00023 332 PANTHER MRNA-CAPPING ENZYME 134 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi495g00023 Sebi-Chr495 503402 506092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi495g00023 46 309 Protein tyrosine phosphatase (PTP) family AT3G09100 57.358 1.81e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi495g00023 K13917 - gmx:100803597 396.741