Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi494g00033 ATGGCGGCGTCTCTCATTCGCCTTCACTTTCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTTGATGATAGCGGTAGTATCGAAAGCGAAAAGAGTGCACGTCCGAATTTAAATTCAGTGAGGGGATTTGAAGTGATTGATCAAGCGAAATCAGAGGTCGAGAAAGTATGCCCCGGCGTTGTGTCATGTGCAGACATCGTAGCAGTAGCAGCGCGTGATGCATCATTTGCTGTAAGCTTGCATATTAATTAA 261 0.4483 MAASLIRLHFHDCFVQGCDASILLDDSGSIESEKSARPNLNSVRGFEVIDQAKSEVEKVCPGVVSCADIVAVAARDASFAVSLHIN 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi494g00033 86 ProSiteProfiles Plant heme peroxidase family profile. 1 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 SUPERFAMILY Heme-dependent peroxidases 1 81 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 Gene3D - 1 84 - -
Sebi494g00033 86 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Sebi494g00033 86 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 PANTHER PEROXIDASE 72-RELATED 1 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00033 86 Pfam Peroxidase 1 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi494g00033 Sebi-Chr494 765303 765673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi494g00033 1 78 Peroxidase AT1G14550 80.769 2.27e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi494g00033 K00430 - gmx:100818538 146.362