Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi494g00032 ATGGTGGGTGGTCCATCATGGACTGTGAAGCTTGGACGGAGAGACTCCACCACAGCAAGCAAGAGTTTGGCTAACAGTGACCTTCCATTATTTTCTGATGATCTTCAAACTCTTATATCTCGTTTTAGCAATAAAGGGCTCAGCGCCAGAGAAATGGTTACTCTATCTGGTGCCCACACAATTGGACAAGCTCAATGCTCCACATTCCGTGGCAGGATATACAACAATGCTAGTGACATAGATGCTGGATTTGCGAGCACTCGCCAACGTGGTTGCCCATCCTCAAGTAGCCCTGACAATGATAAGAAGTTGGCAGCACTAGACTTGGTCACACCCAATTCTTTTGACAACAACTACTTCAAGAACTTAATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTCTATTTAGTGGAGGATCTACGGATTCTATTGTGTCTGAATATAGCAATAATCCAACAACATTTAAGTCCGACTTTGCAGCTTCTATGATAAAGATGGGAGATATTGAACCGTTAACCGGGTCAGCTGGGGTGATAAGAACGATATGCAGTGCTGTCAACTAA 567 0.4356 MVGGPSWTVKLGRRDSTTASKSLANSDLPLFSDDLQTLISRFSNKGLSAREMVTLSGAHTIGQAQCSTFRGRIYNNASDIDAGFASTRQRGCPSSSSPDNDKKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSNNPTTFKSDFAASMIKMGDIEPLTGSAGVIRTICSAVN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi494g00032 188 Gene3D Peroxidase, domain 2 29 167 - -
Sebi494g00032 188 PRINTS Haem peroxidase superfamily signature 51 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 Gene3D - 1 188 - -
Sebi494g00032 188 Pfam Peroxidase 2 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 FunFam Peroxidase 29 167 - -
Sebi494g00032 188 SUPERFAMILY Heme-dependent peroxidases 2 188 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 ProSitePatterns Peroxidases proximal heme-ligand signature. 51 61 IPR019793 -
Sebi494g00032 188 ProSiteProfiles Plant heme peroxidase family profile. 1 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PANTHER PEROXIDASE 72-RELATED 2 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Plant peroxidase signature 162 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Plant peroxidase signature 122 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Plant peroxidase signature 50 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00032 188 PRINTS Plant peroxidase signature 106 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi494g00032 Sebi-Chr494 764141 764825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi494g00032 2 188 Peroxidase AT1G14550 68.254 2.99e-85 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi494g00032 K00430 - gmx:100786161 338.961