Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi494g00030 ATGGCTGCGTCTCTCATTCGCCTTCACTTTCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATATTGCTTGATGATAGCGGCAGTATCGAGAGCGAAAAGAGTGCACTTCCGAATGTAAATTCAGTGAGGGGATTTGAAGTCATTGATAAAGCAAAAGCTGAGGTGGGTGGTCCATCATGGACTGTGAAACTTGGACGAAGAGACTCTACCACCGCAAGTAAAAGTTTGGCTAATAGTGACCTTCCATTATTTACCGATGACCTTGAAACTCTTATTTCTCGTTTTATCAAGAAAGGACTCAGTGCCAGAGACATGGTGGCCCATACAATCGGACAAGCTCAGTGCTTCACATTTCGTGGGAGGATATATAACAATGCAAGTGACATTGATGCTGGATTTGCTAGAACCCGCCAACGTGGCTGTCCATCTTCCAGTAGCCCTGACAACAATAAGAAGCTGGCAGCACTAGACTTGGTCACACCCAATTCTTTTGACAATAAACTACTTCAAGAACTTAATTCAGAAGAAAGGTCTTCTTCAATCAGATCAACTGCTATGATAAAGATGGGAGATATTGAACCGCTAACCGGGTCAGCTGGGATAATAAGAAGGATTTGCAGTGCTATCAACTAA 636 0.4324 MAASLIRLHFHDCFVQGCDASILLDDSGSIESEKSALPNVNSVRGFEVIDKAKAEVGGPSWTVKLGRRDSTTASKSLANSDLPLFTDDLETLISRFIKKGLSARDMVAHTIGQAQCFTFRGRIYNNASDIDAGFARTRQRGCPSSSSPDNNKKLAALDLVTPNSFDNKLLQELNSEERSSSIRSTAMIKMGDIEPLTGSAGIIRRICSAIN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi494g00030 211 ProSiteProfiles Plant heme peroxidase family profile. 1 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 Gene3D Peroxidase, domain 2 83 176 - -
Sebi494g00030 211 PRINTS Haem peroxidase superfamily signature 57 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 PRINTS Haem peroxidase superfamily signature 101 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 PRINTS Haem peroxidase superfamily signature 158 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 Pfam Peroxidase 56 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 Gene3D - 57 82 - -
Sebi494g00030 211 Gene3D - 1 56 - -
Sebi494g00030 211 SUPERFAMILY Heme-dependent peroxidases 1 211 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi494g00030 211 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Sebi494g00030 211 PANTHER PEROXIDASE 72-RELATED 57 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi494g00030 Sebi-Chr494 750840 751975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi494g00030 1 211 Peroxidase AT1G14550 53.160 4.62e-84 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi494g00030 K00430 - gmx:100811641 313.923