Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi493g00010 ATGATCAATTCAATGTGTGGAAGCTCAGTGTCCCTGAAGAGTGAGAACTCTAGAACCAAACTTCAACCCACTTCTTCAAATGACTCAGTTTTACAGTCTAAGAAAAATGCCACTCAATCCTCTGCTGATTTAGAGCAAACTAGTCTAACCCCACCAAGCTTAAACCTTCCTGCACTCAAATTTGACTTGGATGGAGATGTGGAAGTCCAATCACCAGACAGTTCAATGTGGGAGTCTTTTTTCTCTGATCAGTTAGATGCTGATTTCATGATCTCTTCCCCAGTGAGGAACGTTCCTTCCCCACAAGCTTCTACCTACAACTGCAACTATAACTATGCTCAGGGAATGCAAGGTCAGAGTCTTTCAGGGTGTTCACCACCACGTTTTACATCCCAAATTGGAGCCTTTAACAGCAGCCACAAAGGGAAAGGACTTAGCCCACTTCACAGGGTGTTTAACTCACCAAACAACCAGTACATGCAGCATGTTGAAAATCTTTCACTGCCAGCAATAGAAGAGTTCTTGGAGGACTATCAAGGAGATGAGTTAGGTGGTGGAGGATATTCATCAAACAAGTTGTCTTCTGATATTGGAAACTCATCTGAATGCTTTGACATGCAAACTCCAATTCCATCCATCTTGGACAGCTTGAATATGCCCAATTCCTCAAGCTTGTGCCGAAGCAGTAGCCAAAGAAGAATACATGCTAGCAAGAAGATCTACCAAATCGTCTACCAAGCCTGTCCATACATCAAATTCGCCCACTTCACCGCCAATCAAGCCATCTTCGAAGCCTTCGAGACCGAAGAGCGCGTCCACATCATCGATCTTGACATCCTCCAGGGCTACCAGTGGCCAGCCTTCATGCAAGCCCTCGCCGCACGTCCCGGCGGCGCTCCGTTCCTCCGAATAACCGGCGTCGGCCCCTGCATCGAATCCGTTAGAGAAACCGGACGATGCTTGACAGAATTAGCACACTCGCTTCGAATCCCCTTCGAATTCCACCCTGTAGGGGAGCAATTGGAGGATCTGAAACCGCACATGTTTAACCGTCGCGTTGGAGAGGCCTTGGCGGTTAACACCGTTAACCGTCTCCACAGAGTTCCCGGTAACCACCTTGGGAGCTTGCTTTCCATGATAAGGGACCAAGCACCTAACATAGTGACACTTGTGGAGCAAGAGGCGAGCCACAACGGGCCTTATTTTCTTGGAAGGTTTCTAGAGGCGCTGCATTATTACTCGGCGATTTTTGATTCGTTGGATGCGACGTTTCCACCGGATTCGGCGCAGAGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATAAGGAACATTGTAGCGTGTGAGGGGCCTGAGAGGATAGAGAGGCATGAGAGGTTGGAGAAGTGGAGGAAGATCATGGAAGGGAAAGGGTTCAAAGGTGTGCCGCTGAGTCCTAACGCGGTGACTCAGTCTAGGATATTGCTGGGTTTGTATTCGTGTGATGGGTATCGGTTGACAGAGGATAAAGGCTGCTTGTTGCTTGGGTGGCAGGATAGAGCCATAATAGCTGCATCTGCGTGGCGCTGCTGA 1575 0.4889 MINSMCGSSVSLKSENSRTKLQPTSSNDSVLQSKKNATQSSADLEQTSLTPPSLNLPALKFDLDGDVEVQSPDSSMWESFFSDQLDADFMISSPVRNVPSPQASTYNCNYNYAQGMQGQSLSGCSPPRFTSQIGAFNSSHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGDELGGGGYSSNKLSSDIGNSSECFDMQTPIPSILDSLNMPNSSSLCRSSSQRRIHASKKIYQIVYQACPYIKFAHFTANQAIFEAFETEERVHIIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGSLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGPERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi493g00010 524 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 236 518 IPR005202 -
Sebi493g00010 524 MobiDBLite consensus disorder prediction 1 53 - -
Sebi493g00010 524 Pfam GRAS domain family 225 523 IPR005202 -
Sebi493g00010 524 ProSiteProfiles GRAS family profile. 179 523 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi493g00010 Sebi-Chr493 367767 370919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi493g00010 245 524 GRAS Transcription Factor Family AT1G66350 50.000 1.53e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi493g00010 GRAS 4.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi493g00010 - - pcin:129302477 553.518