Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi493g00002 ATGGAAAAGTTAAATGAAAATGGTTTCCAACTTAGTGTGAAGCTAAGTGAACCAACTCTAGTTGCTCCTGCAGAAGAAACAAAGAAAGGCATGTACTTCCTATCTAACCTTGACCAGAACATTGCTGTTATTGTTAGAACTGTTTATTGCTTCAAAACGCCTGAGAAAGGAAATGAGAAGGCTGTAGAAGTGATCAAGAATGCCTTGAAGAAGGTTCTTGTTCACTATTACCCTCTTGCTGGGAGATTGAGTATAAGCTCAGAGGGTAAACTCATAGTAGACTGCACAGGGGAGGGTGCCCTGTTTGTGGAGGCTGGGGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCAGACCCAGGGACTCTTGGTAAGCTGGTTTATGACATTCCTGGAGCAAAGCACATCCTTCAGATGCCTCCTTTGGTTGCCCAGGTGACCAAGTTTAAATGTGGAGGCTTTGCTCTTGGGTTGTGCATGAATCACTGTATGTTTGATGGCATTGGTGCTATGGAGTTTGTGAACTCTTGGGGTGAAGTAGCCAGAGGCCTACCACTCTCTATTCCTCCAATTCTAGACAGAAGCATACTCAAGGCTCGTAACCCACCTAAGATAGAGCATTTGCACCAAGAATTTGCTGATATTAAAGACAAGTCCAGCACTAATAGCTTGTATGAAGATGAGATGGTCTACAGGTCCTTCTGTTTTGATCCTGAGAAGCTAAAGCAACTGAAGATGAAAGCTATGGAAGATGGGGCTCTTGAATCTTGCACAACTTTTGAAGTTCTCTCAGCATTTGTATGGATAGCTCGAACCAAAGCACTAAAAATGTTGCCAGATCAGGAAACAAAGCTCCTTTTTTCTGTTGATGGAAGGGCTAAGTTTAACCCTCCTCTTCCAAAAGGGTACTGTGGAAATGGGATTGTGCTAACAAATTCTGTATGTCAAGCAGGTGAACTAACAGATAAGCCCTTCTCATATGCTGTGAGGCTCATTCAAGATGCAATCAAGATGGTCACAGACAGTTACATGAGATCAGCTATAGATTATTTTGAGGTGACAAGAGCTAGACCTTCTTTGGCTTGCACCCTTTTGATCACAACTTGGTCTAGGCTGTCCTTCCATACCACTGATTTTGGATGGGGAGAACCTGTTCTTTCAGGGCCAGTGTCACTGCCAGAGAAGGAAGTGATTTTGTTCCTTTCTCATGGCCAAGAGAGGAGAAACATCAATGTGCTTCTGGGTTTGCCAGCTCCTGTCATGAAGATCTTCCAGGATTTGATGCAGATATAG 1299 0.4349 MEKLNENGFQLSVKLSEPTLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKTPEKGNEKAVEVIKNALKKVLVHYYPLAGRLSISSEGKLIVDCTGEGALFVEAGANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVARGLPLSIPPILDRSILKARNPPKIEHLHQEFADIKDKSSTNSLYEDEMVYRSFCFDPEKLKQLKMKAMEDGALESCTTFEVLSAFVWIARTKALKMLPDQETKLLFSVDGRAKFNPPLPKGYCGNGIVLTNSVCQAGELTDKPFSYAVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMQI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi493g00002 432 FunFam Tryptamine hydroxycinnamoyl transferase 218 431 - -
Sebi493g00002 432 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Sebi493g00002 432 Gene3D - 8 213 IPR023213 -
Sebi493g00002 432 Gene3D - 214 431 IPR023213 -
Sebi493g00002 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 427 - -
Sebi493g00002 432 Pfam Transferase family 12 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi493g00002 Sebi-Chr493 55218 57369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi493g00002 11 430 Monolignol Biosynthesis Gene Families AT5G48930 34.722 6.98e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi493g00002 K15400 - gmx:100804504 815.068