Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi492g00021 ATGGATGAGCCTCTGCTCCCATATGGCAGCCCCAGAACGAAGCCTCCGCCAACATCCCAACTTTGTCCTGTCCCCCCCATGAATGACGATATCATTCTTCCTATTTCCCCTTTGGAGTTCAAGGATCGCCTGATCTTTGGCCCTTCTTCTGCTTCCTCAGGGGACCCTTCACCTTTGGTTGAGGCCTTAACACTTGCAACCCCTAATTTCCCAAAATCTTCTTCTTACTACTCTGCATTATCATCACTCTTCAACGCACCACAACAACACTCCTCTTGGCTTATTGATCCCAATTATCCATGGCACAAAACCAACGTCTGTCACTCCAAAACTGCACCACCTTCAGCCATGGCAGTGATTAATGATTTCAATCATCAACCCGCTGAGCCAAGACCCCAAGTTGGTAGACACTTTATTGTTCGCCAGGCTATTGTTCTTCTTGTTCTTTATTTGGCATTGGGGATGATCATTTATTGGTTGAATCGTCCTAATTTTTTAGCAACTGAGACTCATCCTATAGTGGACGCAATATATTTTTGTATAGTGACAATGTGCACAATAGGCTATGGTGACATCACTCCCAATACTACAACAACAAAGCTTTTCTCTATGTTGTTTGTATTGGTGGGTTTTGGTTTTATTGGCGTATTGCTAAGTGGGATGGTTAATTATGTTCTTGATTTGCAGGAGAATCATTTGTTGAGGGCTGTGAAAGGTAGGGGTACAGAAAATAATGGGATGTCATATATAATTGATGTGAAGAAAGGGAGGATGAGGATTAGGATAAAGGTGGCATTGGCATTGGGGGTTGTGGTGCTTTGTATTGGAGTTGGTGTTGGAGTTATGCACTTTGTGGAAAGGCTTGGATGGTTAGATTCTTTTTATCTTTCTGTTATGTCTGTGACAACGGTTGGGTATGGCGACCATGCATTCAAGACCTTGCATGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCAACACTTGCAGTGGCCCGGGCATTCCTCTATTTTGCTGAGGCAAGAGTGGATAAGAGGCATAGGAGGTTCGCAAAGTGGATTCTTGGCCGGGATATGACTATTTCTGAGTTTGTTGCTGCAGACATAGATAATAATGGGTTTGTGAGGTATGGACTGATCTATTTCCATTTCATAAAAGTTCAGTAA 1167 0.4319 MDEPLLPYGSPRTKPPPTSQLCPVPPMNDDIILPISPLEFKDRLIFGPSSASSGDPSPLVEALTLATPNFPKSSSYYSALSSLFNAPQQHSSWLIDPNYPWHKTNVCHSKTAPPSAMAVINDFNHQPAEPRPQVGRHFIVRQAIVLLVLYLALGMIIYWLNRPNFLATETHPIVDAIYFCIVTMCTIGYGDITPNTTTTKLFSMLFVLVGFGFIGVLLSGMVNYVLDLQENHLLRAVKGRGTENNGMSYIIDVKKGRMRIRIKVALALGVVVLCIGVGVGVMHFVERLGWLDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYFAEARVDKRHRRFAKWILGRDMTISEFVAADIDNNGFVRYGLIYFHFIKVQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi492g00021 388 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 172 360 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi492g00021 388 MobiDBLite consensus disorder prediction 1 20 - -
Sebi492g00021 388 FunFam Two-pore potassium channel 3 247 361 - -
Sebi492g00021 388 SUPERFAMILY Voltage-gated potassium channels 253 360 - -
Sebi492g00021 388 PRINTS Two pore domain K+ channel signature 302 311 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi492g00021 388 PRINTS Two pore domain K+ channel signature 182 210 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi492g00021 388 Pfam Ion channel 270 340 IPR013099 -
Sebi492g00021 388 Pfam Ion channel 146 225 IPR013099 -
Sebi492g00021 388 Gene3D - 133 245 - -
Sebi492g00021 388 Gene3D - 247 355 - -
Sebi492g00021 388 SUPERFAMILY Voltage-gated potassium channels 139 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi492g00021 Sebi-Chr492 371919 373085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi492g00021 3 375 Ion Channels AT4G18160 59.115 6.24e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi492g00021 K05389 - gmx:100804249 520.776