Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi492g00014 ATGGCCCATTCTAACTTGAAGAAGAGAAAGTCTACCTTGATTACTGATGGGAATCCTGCTGCATTTAAGCAGCCAGAAGATATCTTTACTAGAGAAGAAAAATATAGTGAGGATAAGGATAACAATGATGCTGGAGGAGATGATGATGTGATTGATAACAATGATGCTGGTGACAACACAGATGAAGAAAAAGCTGGAGGAGATGATGATGCCATTGATGATCATCAAGAAGAAGCAGAGTACTTACTAGGAGATGAGGGTCCAACAACTGCTACAGAGGAGGAATTTCACAAAGGTCTGCTCACAAAAGATGGAGATGAAAAGAATAAGCTTTCTACTCGACATTTCAACCATGGATGTTACTTGGTCCAAGGAAAGATGGACCATGGAATGGAAGACTATGTTTTTGCTCAACACAGGAAGCTTAATGGTTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCAGGTCGTGATGTAGCAAAATACTTACAAAGCCATCTATTTGAAAACATACTGAGTGAGCCTGATTTCTGGAGAAATCCAGTGCATGCTGTTAAGAAAGCATGTAAAGCTACAGATGATGAGATTTTAGAAAGCATAGCTGATTCACGTGGAGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTAAAGCTAGTGGTAGTCAATGTTGGTGATTCTAGAGCAATATCATGCAAAAATGGTCTTGCAAAACAAATTACTGTGGATCATGATCCAGAGAAGGAGAAAGATCTTGTTGAGAGTAGAGGAGGTTTTGTGTCCAAGAAACCTGGGAGTGTTCCAAGAGTAGATGGCCAATTAGCTATGACAAGAGCATTTGGAGATGGAAAACTTAAGGAGCACATTACTGCAGAACCAGATGTGATGATTCAGAAGATTGGTGAGGACACTGAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTGATGACAAATCAGGAGGCTTGTGATTGTATCAGGGATGTTGATGATGCTCGACAAGCATCTAAAATGTTAGTTAAAGAAGCCAAATCAATGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTTTAG 1092 0.3938 MAHSNLKKRKSTLITDGNPAAFKQPEDIFTREEKYSEDKDNNDAGGDDDVIDNNDAGDNTDEEKAGGDDDAIDDHQEEAEYLLGDEGPTTATEEEFHKGLLTKDGDEKNKLSTRHFNHGCYLVQGKMDHGMEDYVFAQHRKLNGYDLGLYAIFDGHSGRDVAKYLQSHLFENILSEPDFWRNPVHAVKKACKATDDEILESIADSRGGSTAVAAILINGVKLVVVNVGDSRAISCKNGLAKQITVDHDPEKEKDLVESRGGFVSKKPGSVPRVDGQLAMTRAFGDGKLKEHITAEPDVMIQKIGEDTEFIILASDGLWKVMTNQEACDCIRDVDDARQASKMLVKEAKSMGSYDDISCIVVMF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi492g00014 363 CDD PP2Cc 116 361 IPR001932 -
Sebi492g00014 363 Gene3D - 111 363 IPR036457 -
Sebi492g00014 363 SMART PP2C_4 113 361 IPR001932 -
Sebi492g00014 363 MobiDBLite consensus disorder prediction 26 41 - -
Sebi492g00014 363 FunFam Probable protein phosphatase 2C 39 108 363 - -
Sebi492g00014 363 SUPERFAMILY PP2C-like 113 363 IPR036457 -
Sebi492g00014 363 ProSiteProfiles PPM-type phosphatase domain profile. 117 363 IPR001932 -
Sebi492g00014 363 PANTHER PROTEIN PHOSPHATASE 80 361 IPR015655 GO:0004722|GO:0006470
Sebi492g00014 363 MobiDBLite consensus disorder prediction 42 72 - -
Sebi492g00014 363 MobiDBLite consensus disorder prediction 1 72 - -
Sebi492g00014 363 Pfam Protein phosphatase 2C 145 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi492g00014 Sebi-Chr492 299799 304056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi492g00014 105 363 PP2C-type Phosphatase Gene Family AT4G28400 57.308 2.77e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi492g00014 - - gmx:100814772 558.91