Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi492g00013 ATGGATTCAGTAGCTTCTGGGTTGTTGGCCACTATGTTGGACAGGCTAGCAACCACTGCTTTTAGGAACATTTCCATGGCAAGGGGTCTCCAAGTTGATGTGGGCACCCTCCAAGAATCTCTCACACTCATCGGTGCCTACATTATGGATGCTGAGAACAAGCAAACCCAACACCAATCCATATTGCTCTGGCTGCAACAACTCAAAGAAGCTTTCTTTGATGCCAGTGACATCTTGGATGAGATTGAGTGTGAGGCTCTTAGGAATCAAGTTGTGAACAGACATGGAGGCTTCACCACAAAGATGGCCCACAAGATCAAGGACATTAAGGAGAGGATAGATGAAATAGCTACTCTTAGGATGAAATTGGGTCTCCCAGTGATCCCTGAAAGTAGTACTAGTGTGTCACTCCATCAGAACATGGCTTGGAGAGAGACCCATTCTTATGTTAGGCCTTCCCTTGTGATTGGTAGAGATGAGGAGAAAGAAAAGATCATTGGGTCTTTGATGGTTCCACCATCTGATAGTGATGGAATTGATGTTATTCCTATTGTTGGAATTGGAGGATTGGGGAAGACCACACTTACCCAATTAGTGTACAATGATGAAAGGGTCATTGAGCATTTTAATTTGCGTATGTGGGTGTTTGTTTCTGATGATTTTGATGTTAAGAGGTTAGTACTAGAGATTATTAAAGCTATGCAAGGAACAGATGTAGTAGATGCTCACAACAAAAGTTTTGATCAATTACAAAATCTACTTCGTGAGGGATTATGTGGGAGAAATTTTCTACTTGTTCTAGATGACGTGTGGAATGAAGATTATAGAGAATGGCTTCAATTGAGAAATCTTTTAGTAGGTACACATGATAAAGATAACAAATTTGGTAACAAGATTATCACAACCACTCGTAGTGACAAAGTTGCTTCAATTATGGGGAATGTTTATAAACACAACTTGAAATATCTCCCTGAGGAAGATTGTTTAAAGCTATTTGTTAAGTGTGCATTTCCGGCAGGAGAGGAGAAAAAGCACCCAAGGCTTCTAGAAATTGGGAAGGATATTGCTAGAAAGTGCCAAGGGTTGCCCTTGGCAGTGGTAAGTTTAGGGTACCTGCTTTACTCAAAACCTGGAGAAAATGAGTGGAAGAAAATAAGAGATAGTGAAATTTGGAAGATGAACCAACAAGATGATGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGCCATCTAGATTGAAACAATGTTTCTCTTATTGTTCAATATTTCCTAAGGGTTATCACTATACTAATCTAGAGCTGATTTCATTTTGGATGGCACATGGACTACTACAAACCAAAGATGAAGATGAAGAGCCGGAAGAACTTGGGGAGATTTATATTAAGGAGTTGGTTTCAAGATCTTTCTTTGAAGCTGTCCCTGAAGAACTAGTAGTTATTGATGGTCTTATTTTTGAAGAACTTGAGCTTCTTGGCATCTCTTTTTTCAAAATGCATGATCTTGTTCATGACCTTGCTGTGTCCACAATGCCAAATGAAAGGGCAGTAGTAAAATTTAATACAGCAAATGTTAAAGAAAAGGTGCAACATGTATCATTTTCAGACAGTGGTGAAGGAGTTCCTACTTTTGGTCAAGTATTGAATAAGGTCCGAACCATTGGATTCTGGCATGTAGGTCAAAAAGCATATGCAATTACTGAGCCATTTGTCAGATGGATCTCCAAGGAATTCAAGTACCTCAGGGTGTTGAATATACAAGGTTCAAATTTTCAGTTCTTGCCAGATTGTTTCAACAAAATGAAGCATTTGAGTTTTGAGGATGAAGGAGAAGAAGAAAATGGAAACTACTCCTTGAAACTCGAACGATTTTCAATTGATAAATTACCCAATTTAGCAGCATTACCTGGTTGGCTTAGAAGATCTGGTAAAACTTTGAGATACATGGGTCTTTCAGAGTGTCCAAGCTTAACAGCATTGCCAGAATGGTTGCCAAACCTAACATCACTTGAGACTCTTCTCATTGGTGATTGTCCAAACTTGACACTACCCCAGCGTATGGATCGTCTTCAAAGCCTTCAGAACTTGAAGATATACGGATGTCCTCAGCTAGTTGAGAGATGTAAACGATATACAGGCCTTGACTGGCCCAAAATAGCTCATATCCCAAATGTTGATGCGCAATCCAATTTGGATATGTTAGAGTTCACTATTGACAACTTTGAAATATATGCTGAATTTAGGTGCAATCCTTAA 2259 0.3927 MDSVASGLLATMLDRLATTAFRNISMARGLQVDVGTLQESLTLIGAYIMDAENKQTQHQSILLWLQQLKEAFFDASDILDEIECEALRNQVVNRHGGFTTKMAHKIKDIKERIDEIATLRMKLGLPVIPESSTSVSLHQNMAWRETHSYVRPSLVIGRDEEKEKIIGSLMVPPSDSDGIDVIPIVGIGGLGKTTLTQLVYNDERVIEHFNLRMWVFVSDDFDVKRLVLEIIKAMQGTDVVDAHNKSFDQLQNLLREGLCGRNFLLVLDDVWNEDYREWLQLRNLLVGTHDKDNKFGNKIITTTRSDKVASIMGNVYKHNLKYLPEEDCLKLFVKCAFPAGEEKKHPRLLEIGKDIARKCQGLPLAVVSLGYLLYSKPGENEWKKIRDSEIWKMNQQDDGILAALKLSYNHLPSRLKQCFSYCSIFPKGYHYTNLELISFWMAHGLLQTKDEDEEPEELGEIYIKELVSRSFFEAVPEELVVIDGLIFEELELLGISFFKMHDLVHDLAVSTMPNERAVVKFNTANVKEKVQHVSFSDSGEGVPTFGQVLNKVRTIGFWHVGQKAYAITEPFVRWISKEFKYLRVLNIQGSNFQFLPDCFNKMKHLSFEDEGEEENGNYSLKLERFSIDKLPNLAALPGWLRRSGKTLRYMGLSECPSLTALPEWLPNLTSLETLLIGDCPNLTLPQRMDRLQSLQNLKIYGCPQLVERCKRYTGLDWPKIAHIPNVDAQSNLDMLEFTIDNFEIYAEFRCNP 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi492g00013 752 SUPERFAMILY L domain-like 493 713 - -
Sebi492g00013 752 Gene3D - 139 317 IPR027417 -
Sebi492g00013 752 Gene3D Ribonuclease Inhibitor 528 715 IPR032675 -
Sebi492g00013 752 Pfam Rx N-terminal domain 9 95 IPR041118 -
Sebi492g00013 752 Gene3D - 9 117 - -
Sebi492g00013 752 PRINTS Disease resistance protein signature 181 196 - -
Sebi492g00013 752 PRINTS Disease resistance protein signature 257 271 - -
Sebi492g00013 752 PRINTS Disease resistance protein signature 359 373 - -
Sebi492g00013 752 PRINTS Disease resistance protein signature 666 682 - -
Sebi492g00013 752 FunFam Probable disease resistance protein At1g61300 137 317 - -
Sebi492g00013 752 Gene3D - 322 412 IPR042197 -
Sebi492g00013 752 PANTHER DISEASE RESISTANCE PROTEIN RP 59 709 IPR044974 GO:0006952
Sebi492g00013 752 Pfam NB-ARC domain 159 409 IPR002182 GO:0043531
Sebi492g00013 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi492g00013 Sebi-Chr492 293324 296064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi492g00013 179 428 WRKY Transcription Factor Family AT5G45050 26.415 7.93e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi492g00013 - - lja:Lj4g3v0286230.1 922.539