Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi492g00011 ATGGCCTTCTTAGCTCTAAGTGGAACCAACTTCACCACAGATAAGTTAGCACTTGTTGCTCTCAAATCTTCTATCACTAGTAGTGACCCTTACCATATCCTATCTCACAATTGGTCTGCTTCCTCTCCTGTATGCAACTGGGTTGGTGTCACTTGTGATGCTCATCACTATGGCAGGGTGAGGACCCTCAATCTTGCTGACATGGGTCTTAGTGGCACCATACCCTCTGAATTGGGAAACCTCACCTTTCTTATTGAACTTGACATTGGTGGAAACAGTTTCCATGGTGAATTGCCACAACAACTAGTCCACCTGCGGAGATTGAAGTCACTAAATTTGAGCTACAATGAATTTAGTGGAGATGTTCCTACATGGATTGGAGGCTTATCTTCACTCCAACACTTGTACCTTAGAAACAATAAGTTTGGTGGTTTCATTCCAAAATCTTTCTCTAATTTGACAATGCTAGAGATCTTGGCATTGGACCACAATCTCATTGAAGGTACCATTCCCCCTGAAGTTGGCAAAATGACACACTTGTGGATTTTATCAATTAGTTCAAACAAACTTAAGGGAAGCATTCCTCAAACGTTTTCTAACCTCTCTTCCCTTGAGAAAATCAGTTTATCTTATAACTCTTTGACAGGAGGTATTCCGAGGGAGATTGGTGAGATTCCACAGCTGAGAGTAATGTATCTTGGAAATAATCCACTCAGTGGCTCCATCCCATCAACAATCTTCAATCACTCAATGTTGCAAGATATTGAACTTGGCTCCAGCAATTTATCTAGCACTCTTCCATCAAACCTATGCCTTGGACTTCCAAAACTTCAAATACTTTATGTGGGTTTCAATAAGATCTCTGGAAAAATTCCATCTGTTTGGCATCAGTGCAAAGAGTTGACGGATGTGGAATTATCAAACAATATGTTCAGCAGAGGAGGAATACCAGGAGATATTGGAAACTTAACTAAGCTTGCCTCCTTATATCTTGATGAGGACAACTTGGAAGGTCTAGTACTCTACTGGTTTTGGTTTTGGGGTCTTTTTCTCTGGTTTGGTTTGGAACAGAGAGAAATTCCATTCTCTCTTTTTAACATATCTTCAATGAGAGTAATCAGCCTTGAAAAAAACAAGTTAAATGGTAGCCTAACAGAAGAGATGTTTCATCAGCTTCCATTTCTAGAATTCTTGGCATTGGATAATAATCAATTTGTGGGAAGCATTCCAAAATCTATTAGCAATTGCTCGATGCTCCAAGAATTATATCTAGGTGATAACTCCTTCTCAGGTTCTATACCCGAGGAGATTGGTGTTCTTCCTATACTTTCAAATTTAACATTAGGAAGATTTCTTCCATCACAAATCAGCTTAGAAAACTTGGAAGAACTATACTTGTATGACAACCAACTCCATGGAAACATTCCAAGTAGCTTATCCAATGCTTCTAAGCTTAACTACCTGGATTTGAAGTTGAATAAGTTCAATGGAGCTATACCTAATGCTCTTGGAGAGTTGAGATACCTTGAGCAACTTGATGTAGGATACAATAATTTGACTACTGATGCTTCCACTATAGAATTAAGCTTCCTTACTTCTTTGAATTTCCTTCAAATATCAGGGAATCCAATGCATGGACACCTTTCTAAATCAATTGGGAATATGTCTAACTTGGAGCAGTTCATAGCTGATTCTTGCAGCATAATTGCAACAATTCAGGGTTTGCAGTCTCTTCAATATTTGAGTCTTGGAAACAACCAACTAAAGGGAACCATCATTGATGAACTTTGTGCAATGAATCAGCTGAGTGAGTTGTATATAACTGAAAATGAGCTAATTTCTGGAGGGATCCCAACTTGCTTTGGTAATCTTACATCTCTAAGAAAGGTTTACTTGAACTCTAACAAACTGAATCAGGTGCCCTCTTCTCTTTGGAGTCTCAAAGACATTCTGGAGATTTCAGGAAGTATTCCTAGGGACATTGCTAGATTGCAAAACTTGCAAATTCTCAACTTAGCACATAATAAATTGCTAGGGAATATTCCTGACTCATTTGGTACACTTCCAAATGGGATGGCTGTTGCAATCAAATTATTTAATTTGGACTTAGAATTTGGATCAAAGAGCTTTCATACAGAATGTGAAGCAATGCGCAATCTTCGACATCGAAATCTTATCAAGATCATTGGTAGTTGCTCAAATGTTGATTACAAGCTTTTAGTAATGGAATTCATGCCCAATGGGAGCCTTGAAAGTTGGTTATATTCTCATAACAACTATTTGGACTTCTTACAAAGGCTAAATATAATGATAGATGTAGCATCTGCATTGGACTATATGCATCATGGTTCTATGCCAACTGTGGTTCACTGTGATGTAAAGCCTAATAATGTATTATTGGATGAAGACATGGTTGCTCATGTTAGTGACTTTGGCATTGCTAAATTGCTAGATGAAGAACAATCAAAGGAATATACCAAAACCATTGCTACACTTGGCTACATTGCACCAGAGTATGGATCTAAAGGGACTATCTCTACAAAAGGAGATGTATATAGTTTTGGGATTATGTTAATGAAAAAATTTACAAGAAAGAAGCCAACAGATGAGTTGTTTGTTGTTGGATTGAGCATGAAAGGTTGGATTTACCTGAAGAACGGATGA 2664 0.3799 MAFLALSGTNFTTDKLALVALKSSITSSDPYHILSHNWSASSPVCNWVGVTCDAHHYGRVRTLNLADMGLSGTIPSELGNLTFLIELDIGGNSFHGELPQQLVHLRRLKSLNLSYNEFSGDVPTWIGGLSSLQHLYLRNNKFGGFIPKSFSNLTMLEILALDHNLIEGTIPPEVGKMTHLWILSISSNKLKGSIPQTFSNLSSLEKISLSYNSLTGGIPREIGEIPQLRVMYLGNNPLSGSIPSTIFNHSMLQDIELGSSNLSSTLPSNLCLGLPKLQILYVGFNKISGKIPSVWHQCKELTDVELSNNMFSRGGIPGDIGNLTKLASLYLDEDNLEGLVLYWFWFWGLFLWFGLEQREIPFSLFNISSMRVISLEKNKLNGSLTEEMFHQLPFLEFLALDNNQFVGSIPKSISNCSMLQELYLGDNSFSGSIPEEIGVLPILSNLTLGRFLPSQISLENLEELYLYDNQLHGNIPSSLSNASKLNYLDLKLNKFNGAIPNALGELRYLEQLDVGYNNLTTDASTIELSFLTSLNFLQISGNPMHGHLSKSIGNMSNLEQFIADSCSIIATIQGLQSLQYLSLGNNQLKGTIIDELCAMNQLSELYITENELISGGIPTCFGNLTSLRKVYLNSNKLNQVPSSLWSLKDILEISGSIPRDIARLQNLQILNLAHNKLLGNIPDSFGTLPNGMAVAIKLFNLDLEFGSKSFHTECEAMRNLRHRNLIKIIGSCSNVDYKLLVMEFMPNGSLESWLYSHNNYLDFLQRLNIMIDVASALDYMHHGSMPTVVHCDVKPNNVLLDEDMVAHVSDFGIAKLLDEEQSKEYTKTIATLGYIAPEYGSKGTISTKGDVYSFGIMLMKKFTRKKPTDELFVVGLSMKGWIYLKNG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi492g00011 887 Gene3D Transferase(Phosphotransferase) domain 1 747 883 - -
Sebi492g00011 887 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Sebi492g00011 887 Pfam Leucine rich repeat 179 238 IPR001611 GO:0005515
Sebi492g00011 887 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 447 569 IPR032675 -
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 180 354 IPR032675 -
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 357 446 IPR032675 -
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 13 124 IPR032675 -
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 125 179 IPR032675 -
Sebi492g00011 887 Pfam Leucine rich repeat N-terminal domain 13 53 IPR013210 -
Sebi492g00011 887 SUPERFAMILY L domain-like 28 340 - -
Sebi492g00011 887 ProSiteProfiles Protein kinase domain profile. 667 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi492g00011 887 SMART serkin_6 664 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi492g00011 887 SMART LRR_sd22_2 177 203 - -
Sebi492g00011 887 SMART LRR_sd22_2 129 155 - -
Sebi492g00011 887 SMART LRR_sd22_2 274 296 - -
Sebi492g00011 887 SMART LRR_sd22_2 664 683 - -
Sebi492g00011 887 SMART LRR_sd22_2 575 598 - -
Sebi492g00011 887 SMART LRR_sd22_2 458 484 - -
Sebi492g00011 887 Pfam Leucine Rich Repeat 666 687 IPR001611 GO:0005515
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 653 689 IPR032675 -
Sebi492g00011 887 Gene3D Ribonuclease Inhibitor 570 651 IPR032675 -
Sebi492g00011 887 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 686 881 - -
Sebi492g00011 887 Pfam Protein kinase domain 690 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi492g00011 887 SMART LRR_typ_2 105 128 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 392 416 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 129 152 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 624 647 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 458 482 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 274 297 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 575 599 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 664 688 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 153 176 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 225 249 IPR003591 -
Sebi492g00011 887 SMART LRR_typ_2 177 200 IPR003591 -
Sebi492g00011 887 FunFam Piriformospora indica-insensitive protein 2 172 268 - -
Sebi492g00011 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Sebi492g00011 887 Gene3D Phosphorylase Kinase; domain 1 692 746 - -
Sebi492g00011 887 FunFam Os07g0541700 protein 745 832 - -
Sebi492g00011 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 355 556 - -
Sebi492g00011 887 SUPERFAMILY Protein kinase-like (PK-like) 686 871 IPR011009 -
Sebi492g00011 887 SUPERFAMILY L domain-like 352 689 - -
Sebi492g00011 887 FunFam Leucine-rich repeat receptor-like protein kinase 11 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi492g00011 Sebi-Chr492 250725 257186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi492g00011 13 872 Receptor kinase-like Gene Family AT3G47570 34.034 2.14e-135 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi492g00011 Pkinase 5.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi492g00011 - K13420 gmx:100784397 898.271