Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi491g00040 ATGGCCACACTCTACAACTCCCCCACTTTCAGAATCGCCATCGACACTCACCGTGATCCTCTCTTGCCCTTTCTCTGGTCTATCGAGAAAGCCCTAGAAGATTCCAACAATTCCGGTTCGAATCTCAGTGAGTTACTCGGAGGTTGCATCAGGAAATTCAAGGACAGTGATCGGTACCGAAACGACGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGAGTTAGTGTGAATTTTGATAGTATTTTCAAAGAAATGCTGGATAGTAAAGTATGTGCCAACAATGCTTCACTTTATGTGTGGTCTGCATGCTTTTTTGAATCCAAGGGAAGATTGCGTGATGCCCTCACGGTCTATTATCTTGGTATTTGCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCTCAGACTTTATTTCTCAATAGAATTTCTGAAATATGGAATGCTGCTTCAAGCCACAAGGTTGATTGTAAAGAATCTGCAAGGTTGGAAAATAATGGCATTAATCCATGGGACACCTCCATGATGGATGACTTGTTGAAGAAGATATATCCTTTAATTATGAAATTTGATGGGTATCATTCGAGCACTAAATCTTACACAGGAAAAGTTGCCTTGTCTGCTTTGAAGAATGCATCAAGGAAAAAAGTTATAGAGATAGGTTATACTCTTGAGTCTCAATCATATTTATCATCTGAATATGGTCTGACTGCTTTCCAGCTTTATTATTTTAGATTGTCTTCTAAAGATAATCATGTTTCAGAACAGTTTCTACAAGAACTAGGTGGAAAGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTGTATAAGGCATATGTCAACAGTGATCCTGATGATGTCGTCGCACTAAAGATACAAAAGCCAGCTTTCTCTTGGGAATTTTACATGTATCGCCAGCTTGATCAGCGCATTTCAGGCAGAGAAAGGTCAAGATATGGTTTCGCTCATAGAATTCATCTCTATTCTGACTGTAGCATACTCGTCTGTGACTATGCAGCACATGGGACGCTACAGGATGTCATAAACTCTTATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAACAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGAGGTGACCTTACCGAAGATGAGTTCTTGGACCGAAGTGGTTCTTGGTGTGATCAGGGGCTTTGCCTTATTGACTGGGGACGAGGGATTGATCTGCATCTCTTTCCAGATCACACGGTAGACGCGTATGGCATTTGCGCTGTTGTCCATATGATGTTGCATAATTCCTATATGGAAATCGTCAAAAAAGAATCATCTGATGGGGGCTACGAGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACGTTGAACTCTGGAAGACTTTCTTCACTAAGATGCTAAATAAATACCCTGGCGATGATGATAGAAGGTTGCTGCAGGATTTGAGGAAGTCCTTCCAGGGATATATGGGCTCCAATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCGCGAAGCAAAGGGCTTCCTTGTGTTCTGCTTAG 1638 0.4139 MATLYNSPTFRIAIDTHRDPLLPFLWSIEKALEDSNNSGSNLSELLGGCIRKFKDSDRYRNDVRFLKIWLLYMGVSVNFDSIFKEMLDSKVCANNASLYVWSACFFESKGRLRDALTVYYLGICRNAEPIEWLKKAQTLFLNRISEIWNAASSHKVDCKESARLENNGINPWDTSMMDDLLKKIYPLIMKFDGYHSSTKSYTGKVALSALKNASRKKVIEIGYTLESQSYLSSEYGLTAFQLYYFRLSSKDNHVSEQFLQELGGKKYHIKGCAGQGGFAQVYKAYVNSDPDDVVALKIQKPAFSWEFYMYRQLDQRISGRERSRYGFAHRIHLYSDCSILVCDYAAHGTLQDVINSYVVIGKSMEEVLCIYYTTEMLHMVETLHDVGLIHGDFKPDNLLIRYARGDLTEDEFLDRSGSWCDQGLCLIDWGRGIDLHLFPDHTVDAYGICAVVHMMLHNSYMEIVKKESSDGGYEYLPRLPFKRYWNVELWKTFFTKMLNKYPGDDDRRLLQDLRKSFQGYMGSNPQLIKKLKELLAKQRASLCSA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi491g00040 545 Pfam Protein kinase domain 267 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi491g00040 545 ProSiteProfiles BUB1 N-terminal domain profile. 8 161 IPR013212 -
Sebi491g00040 545 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 158 539 IPR015661 GO:0007094
Sebi491g00040 545 Gene3D - 9 160 - -
Sebi491g00040 545 SUPERFAMILY Protein kinase-like (PK-like) 264 503 IPR011009 -
Sebi491g00040 545 Pfam Mad3/BUB1 homology region 1 13 123 IPR013212 -
Sebi491g00040 545 SMART mad3_bub1_i 11 123 IPR013212 -
Sebi491g00040 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Sebi491g00040 545 Gene3D Transferase(Phosphotransferase) domain 1 442 542 - -
Sebi491g00040 545 Gene3D Transferase(Phosphotransferase) domain 1 264 441 - -
Sebi491g00040 545 ProSiteProfiles Protein kinase domain profile. 267 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi491g00040 545 SMART serkin_6 267 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi491g00040 Sebi-Chr491 681222 685889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi491g00040 259 412 MAP Kinase Kinase Kinase Kinase AT3G15220 28.125 2.62e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Sebi491g00040 Pkinase 2.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi491g00040 K02178 - gmx:100783171 815.068