Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi48g00095 ATGGATCGCTTTTTTCCTGAAAAGCTTCTGGGTGAGATTTTTTGGGATGAACCTCTTTCAGCTACAAATCAAAGTGATTTTGTTCAGGATTCCCAGATCACGAGAGCTGAACATTGTCCTCCCCCAACTCAAAGCGCTTTTGTTCAATATAGAAACCTACCCACAATTAAGTTTGGGGAAGAAAGTTCTCTAAACGGATCAAATTCCCAGGCCATGAGTAAAAGAATGCTAGCATTCTTAAGAAAAAATAAGCCTGTTGTAGAGAAAGATAACGTAGCAGAGCATGAAAGAGAACGTTGTTTCAGGCACATGATTAATGAAAGAACGCGGAGGCAGAGGCAGAGGCAATATTGCTTGAACCTGCATTCAATGTTACCTCATGGATCAAAAACAGATAATAATTCTGTAGTTCAAATGGCAGCGAAGGAGATTCAACGGCTACAGGGATGCAAAGAGGAGTTACAGAGGAAAAATTGTGTGCTTGAAGCGAATCTTGAAGCGGTTAAGAGCAACAAAATTGGTGGAAGCAGAGTTCAATATTTAAGAGTGCCATATCCTACATCTGGAATTGATTCTATTATTGAGACCCTTAAATGTTTGAAAGGCCTTGGAGTGGATACCAGAAGAATCAAATCAAAATTTTCCCCACAGGAGTTGTTTGCAGTGTTGGAGATAGAAACCGAGATTGCAGATACTGACGTGGAAAGGGCTATTCAGAGAACACTTGATGAGCTTGAGTGGAAGCTTCATTCTCATGTCCTGGAAGGTTCTGAAAGACAAAGATTAGAATATGAAGAGTCAGACCGAATTTTTTAG 816 0.402 MDRFFPEKLLGEIFWDEPLSATNQSDFVQDSQITRAEHCPPPTQSAFVQYRNLPTIKFGEESSLNGSNSQAMSKRMLAFLRKNKPVVEKDNVAEHERERCFRHMINERTRRQRQRQYCLNLHSMLPHGSKTDNNSVVQMAAKEIQRLQGCKEELQRKNCVLEANLEAVKSNKIGGSRVQYLRVPYPTSGIDSIIETLKCLKGLGVDTRRIKSKFSPQELFAVLEIETEIADTDVERAIQRTLDELEWKLHSHVLEGSERQRLEYEESDRIF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi48g00095 271 Coils Coil 137 157 - -
Sebi48g00095 271 SMART finulus 104 153 IPR011598 GO:0046983
Sebi48g00095 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 163 IPR036638 GO:0046983
Sebi48g00095 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 147 IPR011598 GO:0046983
Sebi48g00095 271 Gene3D - 96 172 IPR036638 GO:0046983
Sebi48g00095 271 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 244 IPR044658 -
Sebi48g00095 271 Pfam Helix-loop-helix DNA-binding domain 102 148 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi48g00095 1 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.319 3.54e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi48g00095 - - gmx:100815874 349.362