Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi48g00089 ATGGCAGAGGGAACAATGTCAATAGTAAGGAAGACAAGCTTTTCCCCCAAAAGTACTTGGATCAAGTTCGATGCTACTGGCCATGGTTCCATAATCAATGTTGACAAGTATGACATCATGCGTCAAGTTCAGATTCATGCTCGTGATCTAAGGATTCTCGATCCCCTTCTCTCTTACCCTTCTACCATTCTTGCTCGAGAAAAGGTTCTTGTTTTGAACTTGGAGGTGCTTTTACAAGACCCAACAGATGAAGATGTGGTCCCTGTTGTTCAGGAATTACAGAGAAGGTTACCTGCCATTACCATTGTTACAAATCAAGAATGTCCTAGTCAACATGGTATTGAAGTTGAAGTGGATGAGTCGCCCTTTGAATTTCGGGCACTAGAGATAGTTTTAGAAGCAATTTGTAGTTTCCTTGATGCACGTACAACAGAACTGGAGATGGCTGCTTATCCTGCGTTAGATGAACTCACCACCAAGGTACATGCATAA 492 0.4228 MAEGTMSIVRKTSFSPKSTWIKFDATGHGSIINVDKYDIMRQVQIHARDLRILDPLLSYPSTILAREKVLVLNLEVLLQDPTDEDVVPVVQELQRRLPAITIVTNQECPSQHGIEVEVDESPFEFRALEIVLEAICSFLDARTTELEMAAYPALDELTTKVHA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi48g00089 163 Gene3D - 7 78 - -
Sebi48g00089 163 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 162 IPR039204 -
Sebi48g00089 163 Gene3D Magnesium transport protein CorA, transmembrane region 83 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi48g00089 Sebi-Chr48 2411218 2412233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi48g00089 15 163 MRS2 Gene Family AT5G64560 56.725 2.46e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi48g00089 K16075 - gmx:100810239 191.43