Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi48g00024 ATGGGAGTTAGAGATTTTCGTATCAAGCTCAAGGCATTCCGGCTGAAACGTTTTTTCTTAGGGAATAGAGGCAAAAAAAGAACTCATGGGATTGCAAACAAGCCTTCATGGATGGTGCCAATAACACATGGTCATCATGTGGTCGAGCATCGTGGAATCTTAGGTGGTTCTGATGACTCGGAATTTGATTCAGTTGTGATACAGAGAGAGCAAATGGATCACACAGAATTTTGGTATTTTGGAATCTTTGATGCTCTAATTGGAGATGGAGTTACCAAGTATATGCAATCCCATTTTTTTGACAAGAAGCTCAAAGAGTCTCATATGAAGAGAAAAACCAAAGAAACACTCAAGAGAGCTTACCTAGGAGCCAGAACAAAGATCAGAGAGGCAAACAAATCAGAGGAAACATGCAGAATAGGTTCAACATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATTGCTAACATGGGAGATTACAGAACTGTTTTGTGCAGAGATGGTATAGCTTATCAGACAACCGGTAGAAACAATCAATCAGCCAAGGGACATTGGTACCGCAGACTCTTTTCAGGCAATTCAACAGGCACAAAGCATTCTAAAGGTTCAGAACTTGTTGTGGGAGGTGACTGGGTCGACCCTGATACTGAATTTTTGATCTTGGCAAGCAATGGTATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATCTGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTTTGATTAGGATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 825 0.4121 MGVRDFRIKLKAFRLKRFFLGNRGKKRTHGIANKPSWMVPITHGHHVVEHRGILGGSDDSEFDSVVIQREQMDHTEFWYFGIFDALIGDGVTKYMQSHFFDKKLKESHMKRKTKETLKRAYLGARTKIREANKSEETCRIGSTSVMVINGEKLVIANMGDYRTVLCRDGIAYQTTGRNNQSAKGHWYRRLFSGNSTGTKHSKGSELVVGGDWVDPDTEFLILASNGIWEVMKNQEAVNLIWHIEDPQEAAECLAKEALIRMSKSNISCLIIRFD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi48g00024 274 Gene3D - 54 274 IPR036457 -
Sebi48g00024 274 CDD PP2Cc 63 273 IPR001932 -
Sebi48g00024 274 PANTHER PROTEIN PHOSPHATASE 65 272 IPR015655 GO:0004722|GO:0006470
Sebi48g00024 274 SMART PP2C_4 40 271 IPR001932 -
Sebi48g00024 274 SUPERFAMILY PP2C-like 63 274 IPR036457 -
Sebi48g00024 274 Pfam Protein phosphatase 2C 214 266 IPR001932 -
Sebi48g00024 274 Pfam Protein phosphatase 2C 74 173 IPR001932 -
Sebi48g00024 274 ProSiteProfiles PPM-type phosphatase domain profile. 59 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi48g00024 Sebi-Chr48 955556 957460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi48g00024 1 273 PP2C-type Phosphatase Gene Family AT3G23360 45.683 4.08e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi48g00024 K19704 - gmx:100794054 456.832