Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi48g00023 ATGCCTTTCAAGAGGTACGTTGAGATTGGTAGGGTTGCTCAGATCAACTATGGCAAGAGTACGGGAGGCTCGTGGTTATCGTTGATGTCATTGACCAGAACAGAGTATGCTCTTGTTGATGCCCCTGATATGGTGAGATCCCAAATGAATTTCAAGAGGCTCTCACTCACTGACATTAAGATTGATATTAAGAGGATCCCCAAGAAGAAGGATCTCATTAAAGCCATGGAGGATGCTGATGTTAAGAACAAGTGGGAGAAGAGCTCATGGGGAAGAAAACTGATTGTGCAGAAAAGAAGGGCAGCCCTCAATGATTTTGATAGGTTCAAGATAATGTTGGCCAAGATCAAGAGGTCTTCTGTTGTAAGGCAAGAGCTTGCTAAGCTGAAGAAGAGCGCATCTTAG 405 0.4395 MPFKRYVEIGRVAQINYGKSTGGSWLSLMSLTRTEYALVDAPDMVRSQMNFKRLSLTDIKIDIKRIPKKKDLIKAMEDADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRSSVVRQELAKLKKSAS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi48g00023 134 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Sebi48g00023 134 Gene3D - 93 128 - -
Sebi48g00023 134 Gene3D - 1 85 IPR014722 -
Sebi48g00023 134 Pfam Ribosomal protein L14 46 118 IPR002784 GO:0003735|GO:0005840|GO:0006412
Sebi48g00023 134 SUPERFAMILY Translation proteins SH3-like domain 5 94 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi48g00023 Sebi-Chr48 901800 903050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi48g00023 1 134 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 73.881 3.66e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi48g00023 K02875 - gmx:100499889 198.749