Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi489g00037 ATGGTGAAGATATACACGACACCAGCACAGAAAGCAATGTCAAAACACTTCCGATGTCTGAAGGATGCAATAGCAGCGCAGTTGAAGCACAGTTGTGAGGTTCTTGGAGAGAAAGATGGAGCAGGGAGTTCAGGTTTGACAAAGGGAGAGACACCAAGGCTTAAGATGCTAGAGCAAAGCCTAAGACAACAAAGGGCATTCCACCAAATGGGAATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTAAGAGCCTGGCTTTTCGAGCATTTTCTTCACCCGCCAAGAGAAGAGGCATGA 327 0.474 MVKIYTTPAQKAMSKHFRCLKDAIAAQLKHSCEVLGEKDGAGSSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPPREEA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi489g00037 108 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 4 107 - -
Sebi489g00037 108 Gene3D - 84 108 - -
Sebi489g00037 108 Pfam Associated with HOX 3 25 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi489g00037 Sebi-Chr489 563243 563986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi489g00037 5 108 Homeobox Transcription Factor Family AT4G36870 83.962 1.69e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi489g00037 - - gmx:100814959 197.978