Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi489g00024 ATGGAAGACAAGAACAGAACACCTTCCAATCCTGCAACCGCCGCTGAGTCAAGCTGGACGCTCGGTGGCGATGACTCCGCCGGCGCCTATTTCTTCTCCGCTGACAGGGACAGAAGCATACTCAGCGACTTCGGCTGGAACCTCGAGCCGGACCGGATCGGCGCCGACGATGGATTGTGGCTTCCTTCTCACACCGCTCCGACCGGTTCGATCGAACCGGAAGCGGCGGCTGCGACATCGTCGTTCAGGTCGAATAACCAGTCGGTTTCTTCCAGCTCCAGCGAGGATCCGCCGGAGAAGTCCACCGTCTCCGATGAGAAACCGCCTGAGATACCGAGTAAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAACCGCGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGACAGAAGGCTGTTAAAAATAGTCCATTCCCTAGGAGCTACTATCGATGTACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAACGCTCCTCCGAGGACCCAACAATTGTGATTACTACATATGAAGGGCAGCACTGTCATCATACCGTTGGATTTCCTCGAGGGGGGATCATAAGCCATGAAGCTGCCTTTGCCGGTAGCCACATGGCTCCTGCGATGTCACAGTTGTATTATCCAGTTCAATTACCAAGAGCTAACACTTTTAGCAGTATTTCTCAGCCTTGCCAACCACAGGATGAAGCTGGAGGATCCAGCGCTACAATGCCACCCGATGCATCGCCACAGCCTCCTACGGATGAAGGACTACTTGGAGATATTGTACCCCCGGGAATGCGCCACAGATGA 852 0.5293 MEDKNRTPSNPATAAESSWTLGGDDSAGAYFFSADRDRSILSDFGWNLEPDRIGADDGLWLPSHTAPTGSIEPEAAAATSSFRSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGSHMAPAMSQLYYPVQLPRANTFSSISQPCQPQDEAGGSSATMPPDASPQPPTDEGLLGDIVPPGMRHR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi489g00024 283 ProSiteProfiles WRKY domain profile. 134 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi489g00024 283 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi489g00024 283 MobiDBLite consensus disorder prediction 74 98 - -
Sebi489g00024 283 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi489g00024 283 MobiDBLite consensus disorder prediction 238 252 - -
Sebi489g00024 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 230 IPR044810 GO:0003700
Sebi489g00024 283 MobiDBLite consensus disorder prediction 99 116 - -
Sebi489g00024 283 FunFam WRKY transcription factor 57 125 199 - -
Sebi489g00024 283 Gene3D WRKY domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi489g00024 283 MobiDBLite consensus disorder prediction 55 127 - -
Sebi489g00024 283 MobiDBLite consensus disorder prediction 238 283 - -
Sebi489g00024 283 MobiDBLite consensus disorder prediction 1 28 - -
Sebi489g00024 283 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi489g00024 Sebi-Chr489 346009 349627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi489g00024 8 282 WRKY Transcription Factor Family AT1G69310 53.000 2.01e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi489g00024 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi489g00024 - - gmx:100170676 417.542