Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi488g00052 ATGGTGGGATGGCTGAATGCGAGGAGAAATTTAGTGCCATTTGTGGGAATGGTGGTGGCTATTTTGGCTCAAAGTGGCAGCATGGTGGTAATCAAAGTTGCCATGAGTGATGGAATAAACAAGTATGTCATGGTTGTGTATTCCATGGCACTCTCCACCTTCATGCTTCTTCCCTTTGCCTTTCTCATCCACAGGTCAGAGCGTCCTCCCATCACGTTCTCTGCACTTTGGAGCTTCTTTTTGCTTGGTTTGCTTGGATCTTCAGCACAGATAATGGCTTATGTTGGCATAGATCTCAGCTCACCTACTCTTGCTTCAGCCATGCTTAACCTCATTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAATAGTATATTGGAGACGTTTTAGCAGCCAAGCTAAAATTTTAGGAACAATAGTATCAGTTACTGGAGCATTTGTTGTGATATTCTACAAGGGCCCACCAATCTTCAAGACACATTCTAACAAACTTCAATTTTCACCACAATTGAACTGGATCTTGGGAGGGTTGTTCCTTGCTGGCGATTCTTTGCTTTGTTCCATGTGGTACATATATCAGGCTTCAGTTACAAGGAAATACCCTGTTGTAACAATCATAGTCTTCTTCCAAATCTTATTTACAACCATTCAGTCGGCAGTATTTGCCTTAATTGTAGTTAGAGATCCAAGCGCATGGCAGCTAAAGCTTGATATGGGGTTGATTGCCATTTTATACCAGGCAATAGCTGCAACAGTGATACGCTATATGCTAACCACATGGTGCGTCCAAAAAGCCGGTCCTCTGTTTTGTGCTATGTTCAAGCCAGTTGGGATCATCTTCACCGTCTTCATGGGTGCAATTTTTCTCGGGGATGATCTTAATCTTGGAAGTTTGATTGGTGCGGTTATAATAGTGGTAGGATTTTATGCTGTGTTGTGGGGAAAAGCCAAAGAAGAGGACAAGATTGAGAGGTTGGAGTCGTCATGCCATAGTGTTCCTCTGTTACAAAACAAGGCATAA 1032 0.4254 MVGWLNARRNLVPFVGMVVAILAQSGSMVVIKVAMSDGINKYVMVVYSMALSTFMLLPFAFLIHRSERPPITFSALWSFFLLGLLGSSAQIMAYVGIDLSSPTLASAMLNLIPAFTFILALIFRMEIVYWRRFSSQAKILGTIVSVTGAFVVIFYKGPPIFKTHSNKLQFSPQLNWILGGLFLAGDSLLCSMWYIYQASVTRKYPVVTIIVFFQILFTTIQSAVFALIVVRDPSAWQLKLDMGLIAILYQAIAATVIRYMLTTWCVQKAGPLFCAMFKPVGIIFTVFMGAIFLGDDLNLGSLIGAVIIVVGFYAVLWGKAKEEDKIERLESSCHSVPLLQNKA 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi488g00052 343 Pfam EamA-like transporter family 181 316 IPR000620 GO:0016020
Sebi488g00052 343 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020
Sebi488g00052 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Sebi488g00052 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 321 - -
Sebi488g00052 343 PANTHER WAT1-RELATED PROTEIN 12 327 IPR030184 GO:0016020|GO:0022857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi488g00052 Sebi-Chr488 801083 804224 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi488g00052 2 339 Nodulin-like Gene Family AT5G40240 43.266 1.84e-83 256