Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi488g00035 ATGTCGGTCTCCTGCTCAAACTGCTTCCCCGATTCCGACCTCCTCTGCGGCGAGGATACCTCCGGCATCTTGTCCGAAGAGTCGCCGGAATGCTCCTCCGACATCGATTCATCACTGCCGTCGGAGGAGGAGTCTATCGCCGGATTCATCGAAGACGAGCACAACTTCGTCCCCGGATTCGACTACTTCTCCAGGTTTCAGTCTCGCTCGCTCGACGCCTCCGCCAGACAAGAATCCGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCGCTCACGGTTTATCTTTCCGTCAACTACATGGATCGGTTCTTGAATTCTCGGCAATTGCCGCAAACAAACGGGTGGCCACTGCAACTTCTGTCAGTTGCGTGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTAGTTCCGCCTCTGTTGGACCTTCAGGTAGAAGGTGCCAAGTACATATTTGAGCCCAGAACAATTAGAAGGATGGAGCTACTTGTTCTGGGCGTTTTGGATTGGAGGCTAAGATCAGTTACCCCGTTTAGCTTCCTCAGTTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACTGGTTTCCTCATTTCACGCGCTACGCAAATTATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCATATTGGCCATCATGCATAGCTGCTGCGGCCATACTCTATGCAGCTAACGAAATTCCTAATTGGTCTGTCGTTAAGCCCGAGCATGCCGAGTCGTGGTGCGAGGGGCTAAGAAAAGAGAAAATTATCGGGTGCTACCGATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAAACCCCTAAAGTGTTACCACAGCTGCGAGTGACAACTCAGCCCCTTATGAGGTCAAGTGTTTCATCATTTTCGTCATCCTCCTCTTCTCCTTCCTCATTGTCTTTTAAAAGAAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGAAACTCCAAGTGA 1002 0.482 MSVSCSNCFPDSDLLCGEDTSGILSEESPECSSDIDSSLPSEEESIAGFIEDEHNFVPGFDYFSRFQSRSLDASARQESVAWILKVQAYYAFQPLTVYLSVNYMDRFLNSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPPLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILYAANEIPNWSVVKPEHAESWCEGLRKEKIIGCYRLMQELVIDNNRRKTPKVLPQLRVTTQPLMRSSVSSFSSSSSSPSSLSFKRRKLNNCLWVDDDKGNSK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi488g00035 333 Gene3D - 59 176 - -
Sebi488g00035 333 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Sebi488g00035 333 FunFam D2/4-type cyclin 59 176 - -
Sebi488g00035 333 Pfam Cyclin, C-terminal domain 178 288 IPR004367 -
Sebi488g00035 333 SMART Cyclin_C_2 178 311 IPR004367 -
Sebi488g00035 333 PANTHER CYCLINS 30 275 IPR039361 -
Sebi488g00035 333 SMART cyclin_7 81 169 IPR013763 -
Sebi488g00035 333 SUPERFAMILY Cyclin-like 160 281 IPR036915 -
Sebi488g00035 333 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Sebi488g00035 333 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Sebi488g00035 333 Gene3D - 50 239 - -
Sebi488g00035 333 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
Sebi488g00035 333 SUPERFAMILY Cyclin-like 38 175 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi488g00035 Sebi-Chr488 642540 645127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi488g00035 1 333 Core Cell Cycle Gene Families AT1G70210 64.688 3.41e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi488g00035 K18810 - gmx:100775224 563.918