Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi488g00016 ATGCGAATTCCAAATGCATTCTCTTCCCTAGTTAGCCCTAGAAGCTTCACGTCTCTAGTTAATCTAATGTGCACGGTGAATCCAAAATTTATACTTCATGATTTCGAAACTGTGACGGAGCTGTGCACGGCGACGAGGATAAGTCATGTCCTCATGAGTTCGACGGAGCTGTGCGCCGGCGACGAGGATGGGGCGCGACAATCGAGACGAGCATGGCCAGCGGCGAGAGCCGCAACGACACATCTCTGTCTTCTCTCGTTCTTCTTATCCGGTCACGGCGATGGGAGAAAGCCCGAGGCGACGGTTGTGCCACCAGAGCAAGCTCGAAAAATTTACCAGGCTCTGAAGGAAAAAGGTGTGCCAGTTGCCCTTATGGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTTCACACTTGAACAATCAATGGTCTTCTTTGCGCGATTGATTGGGAATTTCAATGTTGCTGATGATATTACTCCCATCAAACTTGACAACTTTGATTGA 522 0.4828 MRIPNAFSSLVSPRSFTSLVNLMCTVNPKFILHDFETVTELCTATRISHVLMSSTELCAGDEDGARQSRRAWPAARAATTHLCLLSFFLSGHGDGRKPEATVVPPEQARKIYQALKEKGVPVALMEYEGEQHGFRKAENIKFTLEQSMVFFARLIGNFNVADDITPIKLDNFD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi488g00016 173 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 99 168 - -
Sebi488g00016 173 SUPERFAMILY alpha/beta-Hydrolases 101 154 IPR029058 -
Sebi488g00016 173 Pfam Prolyl oligopeptidase family 102 156 IPR001375 GO:0006508|GO:0008236
Sebi488g00016 173 Gene3D alpha/beta hydrolase 44 162 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi488g00016 Sebi-Chr488 285820 286709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi488g00016 99 173 Carbohydrate Esterase AT5G36210 77.333 2.14e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi488g00016 - - vum:124848396 141.739