Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi487g00032 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAGCAGGGATTTCATGGGGGCTCATAAATTTGCTCTTAAAGCTCAGCAGTTGTATCCTGATCTGGAAAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCATTGCTCTGCTGAGATGAAATTGTTCGGCAATGAGATGGACTGGTATGAAATTCTTCAACTGGAACGGATGGCTAATGATGCAATGATTAAAAAGCAGTACAGAAAGTTCCCACTCCAACTTCATCCCGACAAAAACAAGTTTGCTGGTGCAGAAGCCACATTTAAGCTGATTGGGGAATCTCAAAGAGTACTTTTAGACAGAGAAAAACGATCTCAGTTTGACATGAAGTGCAGGGTTCCAATGAACAAAACTGCTATGCCCTTCATTGCATATAATGTGGATAGGAAAAGTACATCATCAGCAACTAATTCAAGTCAGCAAGCTTTTGGCCAGCAAAAAGATGGTTTGAATCATGATCCTTCCAAGATGGGTGGATCTCAAGGCAACTTGCATGCTGAGAAGTCCAATACTGGGCTTCACGAGAAGAAAGGCCCCGTTGATGTCTCTGGAAAGCCACATGGAAAGAGGAAGAGGAATAAGGTGGCAGAATTTGGTCAAAGTTTTGATTTTACGAGCAGCACTGATTCTGAAGGTGGTAGGGTTGTTGGTGAGGATGGTGCTCCTGGTGTAGAAAATCATTCAACTTACAGAGAAGAGCAACTACGCAGATCTGCACGACAAAAGCATAAGGTTTCCTACAAGGATAATGTGAGTGACAATGATGATGACCTCTTAAGACCTTCAAACAGGGGTAAGGAGTGTGGATCGCCATGTGGTGATGGTGAAAGTCATGCCTCCAAAGCAACAAATCTTCCAATTGCTTATGTCTATTTCGAAGCAGAGTTCAGTGACTTTGACAAGGACAAGAAAAAAGAATGTTTTGTGGCAGGGCAGATTTGGGCTGTTTATGATACAACACATGGCATGCCTAGATTTTATGCTTTAACCAGGAAAGTTCTATCTCCTAGATTCAAGTTGCAGATAACATGGTTGGAATCACATCTAGGTAACAATGATGAAATGAAGTGGGTAAATGAGGATATGCATGTTGCATGTGGGAAATATAAACTTGGTGACACTAACATCGTGAAAGATCATATGATATTCTCTCATGTGGTTACGTGTGAAAAGATTGGCTGCAATACTTTCAAAGTGTATCCTAGAAAGGGAGGAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGCAGAATCTCATAAGCAGTATGAATATGAGTTTGTTAAAATCTTATCAGATTATGTTGATGGTGAGGGTGTATATATTGCACACTTAGCTAAATTCTCTCACAGGATTCCCTCTTTCAAAATGACTGGTCAGGAAGGAGTAGATGTTCCTGTAGGATCTTATGAACTTGATCCTGCAGCTTTGCTGATGAATCTTGAAGAGATTGTTGTTCCTGAAAATTTGGATGTATCTACTCCCAAGGTTAATTTGAAAAGAAGCAATTTGGCTGGCAATAAGGATTGTGTTGATGATATTGATGATTGTCATGCTCCTCCAGCTTCGACCCCAGAAGCTATTGTAGATGGATTGCCAAAATACTATGGCCAGATTGATGGGATTGAGACTAGCCCACATCTTGAATTGCATGTTTCTTGGCTTGCTTTCTGCTGGCTACCAGAGAATACCACTAGATGGGAAGACAAAGATATGGTTATTTCCTGTGGCAGATTTAAAGTTAATACAAGAATTGACTTTCTCAGTGTTTATAGTGGCCCCATTCTGCTTCACACCAAGTGTTTGCTGATGTTGTTGGCAACAAAAAGAATTACACCATCTTTCCAAGGAAAGGGTAAGTCAAATGAAGGATCATCTGTCAACCTGAGAATACCCAGAAAAGAGTTGCTTAGGTTCTCCCACAGAATTCCAGCTTTGAAACTGACAGAAGAGCATGGCAATCTGAGTGGCTTCTGGGAACTTGATCCAGGTGCGCTACCAATTCATTATTATGGCTTGGGATGA 2097 0.4082 MDCNKEEALRAKDIAEKKMESRDFMGAHKFALKAQQLYPDLENIAQMLVVCDVHCSAEMKLFGNEMDWYEILQLERMANDAMIKKQYRKFPLQLHPDKNKFAGAEATFKLIGESQRVLLDREKRSQFDMKCRVPMNKTAMPFIAYNVDRKSTSSATNSSQQAFGQQKDGLNHDPSKMGGSQGNLHAEKSNTGLHEKKGPVDVSGKPHGKRKRNKVAEFGQSFDFTSSTDSEGGRVVGEDGAPGVENHSTYREEQLRRSARQKHKVSYKDNVSDNDDDLLRPSNRGKECGSPCGDGESHASKATNLPIAYVYFEAEFSDFDKDKKKECFVAGQIWAVYDTTHGMPRFYALTRKVLSPRFKLQITWLESHLGNNDEMKWVNEDMHVACGKYKLGDTNIVKDHMIFSHVVTCEKIGCNTFKVYPRKGGTWALFKNWDIKWYMDAESHKQYEYEFVKILSDYVDGEGVYIAHLAKFSHRIPSFKMTGQEGVDVPVGSYELDPAALLMNLEEIVVPENLDVSTPKVNLKRSNLAGNKDCVDDIDDCHAPPASTPEAIVDGLPKYYGQIDGIETSPHLELHVSWLAFCWLPENTTRWEDKDMVISCGRFKVNTRIDFLSVYSGPILLHTKCLLMLLATKRITPSFQGKGKSNEGSSVNLRIPRKELLRFSHRIPALKLTEEHGNLSGFWELDPGALPIHYYGLG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi487g00032 698 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Sebi487g00032 698 MobiDBLite consensus disorder prediction 151 168 - -
Sebi487g00032 698 MobiDBLite consensus disorder prediction 245 283 - -
Sebi487g00032 698 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 297 471 - -
Sebi487g00032 698 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Sebi487g00032 698 SMART dnaj_3 66 123 IPR001623 -
Sebi487g00032 698 Pfam Domain of unknown function (DUF3444) 311 471 IPR024593 -
Sebi487g00032 698 Pfam Domain of unknown function (DUF3444) 554 616 IPR024593 -
Sebi487g00032 698 MobiDBLite consensus disorder prediction 189 206 - -
Sebi487g00032 698 CDD DnaJ 67 120 IPR001623 -
Sebi487g00032 698 Gene3D DnaJ domain 64 177 IPR036869 -
Sebi487g00032 698 MobiDBLite consensus disorder prediction 151 298 - -
Sebi487g00032 698 PRINTS DnaJ domain signature 69 87 IPR001623 -
Sebi487g00032 698 PRINTS DnaJ domain signature 103 123 IPR001623 -
Sebi487g00032 698 PRINTS DnaJ domain signature 87 102 IPR001623 -
Sebi487g00032 698 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi487g00032 Sebi-Chr487 719008 721909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi487g00032 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.846 6.65e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi487g00032 - - gmx:100795200 583.178