Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi486g00027 ATGGAGAACTCTGAATTTTTATCTAGCATTAAGTCTTATGGTAAGGGTAGGGGAGAGGATTCTGAAATGTATGAGAAGGATGAAAAAGAAGATACCGGTGTAGGTCATGAAGCGGTTAATAGGTTGCTTTTGTTGACTGCTGATGAGATTATGTGCCTTGAATTTGGCAGTGAAGAAGAGGCATATAATTTTTATCAATTATATGCGAAGTATCATGGGTTTGTGGTTAGAAAAGATGACACAACAAAGGATATCAGGGGTAATATTATTATGCGACAGTTTGTTTGCAATAAGGAGGGTTTAAGAAAGAAGAAACACTTTATGAGGGTAGATAGGAAAAGGGAGCATAGGCCACTGACCCGTACAAACTGTCTAGCTAAGCTTCGTATACATTACCACCACAAGAGTTTAAAGTGGAAAGTGGTGTCATTTGAGCAATGTCATAACCATGAGCTTACCCCTTCAAGATTTGTCCACCTACACCCTGCTTACCGAAGGTTAACAGATGCTGATAAATCTCAGGTTAATAGTTTGCATGCATATGGTCTTAGAGGTTGTCACATTATGGGCTACCTAGTGGCTCAAAAGGGTGGATATTGTCGTGTTGGTTTTACGAAGAAGGACATGTACAATTATCTTGACCGAAAAAATCAGGCAAAGGTGAAGAAAGGGGATGTACGTGCTGCTTTGAGTTACCTGCAAGGCAAGGCTGATAGTGACCCACTTTTATATGGGAAATACTGTACTGGATCTGATGGTAAATTAAAGCGGCTTTTTTGGGCGGATGGAGTTAGTAGGACATATTGTAAGAAGAAAAGTAGCATGGTTGAATTTTTGCATAAGTTTGAGCAAGCAAAGAAGGAGTACAGAAATAATGAGATGATGGCAGAATTTAAGACTTTGTTTTCGAAGCCAGTGCTTACTACATATCTTCGTAGCATTGAGACAGAGGCTTCTAAAATGCTATTTGAATCTAGAGGGATTCCATGTTCCCATATTATAACTGCCATGAAAAATGAGGAGATGGAACACATTCCTCATAGTTTGATATGCAAAAGATGGTTGAAGAATGCTAAGATTGATTTCATGTCCCATTATGACCATGAAGAAATGGATTCCGATGTAATGGAGCAAGCTTGTTTTGCTGCCATAAGTGCTGCTTGTAACAATTTTGCAAAGGGATGCACAAATGGTAACCCAACAATTGAGCATGTGGGTGATCCAAGTAAAGTGAAAACTAAAGGTGCACCTAAGAAGAAAAAGGATATGAAGAGGAGGAGAAGACATTGTTCCAATTGTAGTAGCACAGGACACACAATAAGGAGATGCCCATTAAGATATGGCCCGAATGAGAAGAGTAAAAATGATGTAGAGTTATCAAATTCAAAAAACAATGGTGACACTGAAGCAAATGACAGTGAGAAAGATGTAATGGATACTGTTGAAGCAAATGGTGAACAATCAAATGCTAATGAGAAGAAGGTTGAGGAATCAAATGGACAGGAAAATAATGGACAACAAACCAATGTTCAGTTTGATTGTTCAAGGCAGAATGTGAAAAAAGCAAAAGAGAAATTAAGTGGATTGCGTAAACAAAAAGGAAAGACTGTGAGAGAAGATTCAAATCCAAAACATTCTGAGGCAGCGGAAATAAAACCGGGTGGTTGTTCAGATGGAGTTAATGTTGGAAATGGTAAAGTGCCACCTATGATGCCAAATATGGTTCCGGCAATACATTATCCTGGTTATGGAATGTTCAGTCAAGGATATCCAATACATCCACACTTTAGTCGTCCTTCAATTCAGAATCCAAATATGGGAGTCCCCATGTACAATCAAAATTACCAGTTTCCTGTCTATCAGCAACAAGCTCAGCCTTCAATGTATTCACATGGAGCCCAGTTTTATCCTGGTATGTGGAACCCACCTACTAATGGTACTTCTATGAATGATCTGTTGCAACAAGTAATGAATAATGGTGTTCAAAGAAGTGAAAAGGAAGGAGAACATTAA 2013 0.3865 MENSEFLSSIKSYGKGRGEDSEMYEKDEKEDTGVGHEAVNRLLLLTADEIMCLEFGSEEEAYNFYQLYAKYHGFVVRKDDTTKDIRGNIIMRQFVCNKEGLRKKKHFMRVDRKREHRPLTRTNCLAKLRIHYHHKSLKWKVVSFEQCHNHELTPSRFVHLHPAYRRLTDADKSQVNSLHAYGLRGCHIMGYLVAQKGGYCRVGFTKKDMYNYLDRKNQAKVKKGDVRAALSYLQGKADSDPLLYGKYCTGSDGKLKRLFWADGVSRTYCKKKSSMVEFLHKFEQAKKEYRNNEMMAEFKTLFSKPVLTTYLRSIETEASKMLFESRGIPCSHIITAMKNEEMEHIPHSLICKRWLKNAKIDFMSHYDHEEMDSDVMEQACFAAISAACNNFAKGCTNGNPTIEHVGDPSKVKTKGAPKKKKDMKRRRRHCSNCSSTGHTIRRCPLRYGPNEKSKNDVELSNSKNNGDTEANDSEKDVMDTVEANGEQSNANEKKVEESNGQENNGQQTNVQFDCSRQNVKKAKEKLSGLRKQKGKTVREDSNPKHSEAAEIKPGGCSDGVNVGNGKVPPMMPNMVPAIHYPGYGMFSQGYPIHPHFSRPSIQNPNMGVPMYNQNYQFPVYQQQAQPSMYSHGAQFYPGMWNPPTNGTSMNDLLQQVMNNGVQRSEKEGEH 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi486g00027 670 MobiDBLite consensus disorder prediction 414 432 - -
Sebi486g00027 670 Coils Coil 512 539 - -
Sebi486g00027 670 Pfam FAR1 DNA-binding domain 63 153 IPR004330 -
Sebi486g00027 670 MobiDBLite consensus disorder prediction 1 32 - -
Sebi486g00027 670 MobiDBLite consensus disorder prediction 500 516 - -
Sebi486g00027 670 ProSiteProfiles Zinc finger CCHC-type profile. 430 444 IPR001878 GO:0003676|GO:0008270
Sebi486g00027 670 MobiDBLite consensus disorder prediction 517 547 - -
Sebi486g00027 670 MobiDBLite consensus disorder prediction 15 32 - -
Sebi486g00027 670 PANTHER OS01G0519700 PROTEIN 319 364 - -
Sebi486g00027 670 MobiDBLite consensus disorder prediction 405 557 - -
Sebi486g00027 670 Coils Coil 670 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi486g00027 Sebi-Chr486 422035 425328 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi486g00027 FAR1 2.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi486g00027 - - ccaj:109792835 324.324