Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi486g00014 ATGTTTTCTTCTACATTGAGGAATTGTCGTAGCTACCATGGGCTTTTCCTTTTGTTTGCACTTTTGTTAAGTCTCTGTTTTGACACTGCAACCTCTCGATCAAGGATTGAAGTGCTCCCTGGCTTTCAAGGCCCCCTTCCTTTTGAGCTTGAAACTGGGTATGTGGGATTAGGAGAAACAGAGGATGATCTGCAAGTGTTCTACTACTTCATTAAGTCAGAGAACAATCCAAAGAAAGATCCTCTTTTGCTTTGGTTAAGTGGTGGTCCTGGTTGCTCTTCATTTACGGGTCTCATCTACCAAATCGGTCCAATTGAATTTGAAATTAAAGAATATCCCAATGGGAGCTTGCCTGATTTGATCTTGAGGAAACCGTCCTGGACAAAGGTATGTAGCATTATTTTCATAGATTTGCCATTTGGAACCGGCTTCTCTATTGCGAAAAATGTTCGAGCACAACGAGGAGACAGGAAATTTGTTCAACATACCTATCAATTTCTTAGAAAGTGGCTGGTTGAACACTCAGAATTTCTTTCAAACAAATTGTTCATCGGTGGTGATTCATACTCTGGCATTCCTCTGCCCGCTATTGTTCATGAAATTGTTAATGGAAATGAAAAAGGTCTTCAACCACGGATGAATCTCCAGGGATATCTGCTAGGCAACCCTGTAACAGGTGGAAGTGAAAGAAATGAGAAAATCCCATATGCCCATGGAATGGGACTTATCTCTAATGAACTTTATGCGTGCGTTTCAGGAGTTAATAAGTACCAAATTTTGGATCCTTATTGCCTTGATTTGAGTAAGCAACGCGAAGCTCCACAAAGGAGATCTATGACTCAAAAGTTGGAGTTGGAGCCTTCTTTTGGTCATCGTTTGGCTGTCTCACAATTGCTTTGCGATACTTTTCGTTATTCGCTTAGCGATACATGGATGAATCATGAAAGTGTTCGCAAAGCACTGCATGTTCGACAGGGAACTGTAGGGCGCTGGCAACGTTGTTATGCTGATGATTATGACGAAGAAATCTCTAGCAGCTTTGAGTTTCATGTAAAACTTAGTGCAAAAGGCTACCCTTCCTTAATATACAGTGGGGATCATGACTTGACTGTTCCTCACTTGTCAACGCAATCATGGATAAAGGCTCTAAACTACTCCATTGTGCATGATTGGAGGCAATGGCGTGTCGATGGCCAAGTTGCAGGATACACGAGAACTTACTCAAATAAAATGACATTTGCGACTGTGAAGGCTGCAGGACATGCAGCTTCTGAGTTCAAGCCTGATGAATGTTTTGTCATGTTCACTAGATGGATATCTAATGTGCCTTTGTAA 1335 0.4157 MFSSTLRNCRSYHGLFLLFALLLSLCFDTATSRSRIEVLPGFQGPLPFELETGYVGLGETEDDLQVFYYFIKSENNPKKDPLLLWLSGGPGCSSFTGLIYQIGPIEFEIKEYPNGSLPDLILRKPSWTKVCSIIFIDLPFGTGFSIAKNVRAQRGDRKFVQHTYQFLRKWLVEHSEFLSNKLFIGGDSYSGIPLPAIVHEIVNGNEKGLQPRMNLQGYLLGNPVTGGSERNEKIPYAHGMGLISNELYACVSGVNKYQILDPYCLDLSKQREAPQRRSMTQKLELEPSFGHRLAVSQLLCDTFRYSLSDTWMNHESVRKALHVRQGTVGRWQRCYADDYDEEISSSFEFHVKLSAKGYPSLIYSGDHDLTVPHLSTQSWIKALNYSIVHDWRQWRVDGQVAGYTRTYSNKMTFATVKAAGHAASEFKPDECFVMFTRWISNVPL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi486g00014 444 SUPERFAMILY alpha/beta-Hydrolases 38 443 IPR029058 -
Sebi486g00014 444 Gene3D alpha/beta hydrolase 42 443 IPR029058 -
Sebi486g00014 444 Pfam Serine carboxypeptidase 40 441 IPR001563 GO:0004185|GO:0006508
Sebi486g00014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Sebi486g00014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Sebi486g00014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Sebi486g00014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Sebi486g00014 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 428 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi486g00014 Sebi-Chr486 230731 236669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi486g00014 30 59 Calmodulin-binding Proteins AT2G22960 63.333 2.05e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi486g00014 K16296 - gmx:100780069 589.726