Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi486g00009 ATGTCGAGCACTGCTGGTCTTGTCATCCCATGCAATGCTGCGGTTGCATGGGAAGCAGGGAAACCTTTGGTGATGGAGCGTGTGGAGGTGGCTCCACCACAGGCCAGGGAAGTGAGGATCAAAGTCAAATATACCTCACTTTGCCACACTGATCTTTACTTCTGGGAGGCCAAGGGACAAACTCCTCTGTTTCCCCGAATTTTTGGCCATGAGGCAGCCGGAATTGTGGAGAGTGTTGGAGAAGGTGTCACAGATCTGCAGGTTGGGGATCATGTGCTCCCAGTATTCACTGGGGAATGTGGTGAGTGTGCACATTGCAAATCTGAGGAAAGTAACATGTGTAACCTGTTGCGAATAGATACAAACAGAGGAGTCATGCATAGTGATGGTAAAAGCAGATTCTCTATTAAAGGTACCCCAATAAACCACTTTGTTGGCACATCCACTTTTAGTGAATACACTGTGGTACATTCTGGCTGCCTAACAAAGATCAATCCACTAGCACCTATGGACAAAGTCTGTGTCCTCAGTTGTGGCATCTCAACAGGGTTAGGAGCAACTTTAAATGTAGCAAAACCAAAGAAGGGCTCTACAGTAGCTGTATTTGGTCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGTGCAAGAATTGCTGGTGCATCTAGAATTATTGGAGTTGATTTGAATCCAAATAGGTTTGAGGAAGCCAAGAAATTTGGGGTAACCGAGTTTGTGAATCCAAAGGACTATGATAAGCCAGTTCAAGAGGTGATTGCAGATATGACAAATGGTGGAGTAGACCGAAGTATAGAGTGCACTGGAAACATCAATGCCATGATATCCGCTTTTGAATGTGTTCATGATGGGTGGGGTGTTGCTGTGCTGGTTGGAGTACCCAATAAAGATGCAGTTTTCATGACCAAGCCCATTAATGTGCTCAATGAAAGAACACTGAAAGGAACTTTCTTTGGAAATTACAAGCCCAGGACTGACCTTCCCTCTGTTGTTGATATGTACATGAATAAGACATTGGAACTGGACAAGTTTATAACCCATAGGATTCCTTTTTCTGATATCAACAAGGCATTTGATTTAATGTTGAGAGGTGAGGGAATAAGGTGTATTATTAGCATGGATGACTAG 1143 0.4436 MSSTAGLVIPCNAAVAWEAGKPLVMERVEVAPPQAREVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTDLQVGDHVLPVFTGECGECAHCKSEESNMCNLLRIDTNRGVMHSDGKSRFSIKGTPINHFVGTSTFSEYTVVHSGCLTKINPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPNRFEEAKKFGVTEFVNPKDYDKPVQEVIADMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKTLELDKFITHRIPFSDINKAFDLMLRGEGIRCIISMDD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi486g00009 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Sebi486g00009 380 Gene3D - 183 321 - -
Sebi486g00009 380 CDD alcohol_DH_plants 9 376 - -
Sebi486g00009 380 Gene3D - 19 370 - -
Sebi486g00009 380 Pfam Alcohol dehydrogenase GroES-like domain 36 162 IPR013154 -
Sebi486g00009 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Sebi486g00009 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Sebi486g00009 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Sebi486g00009 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Sebi486g00009 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Sebi486g00009 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 341 IPR036291 -
Sebi486g00009 380 PANTHER ALCOHOL DEHYDROGENASE 8 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi486g00009 Sebi-Chr486 145095 148399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi486g00009 22 181 Monolignol Biosynthesis Gene Families AT4G37970 30.247 3.51e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi486g00009 K18857 - zju:107426564 679.093