Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi486g00003 ATGGGCGAACCCATTCTCCTCCGTGACCGATGCATCCTCCGCATTAGGAACAAGTCTGTGCAGCTCTCATTTGCTCAAACTGGCTATCGCAATAGGAACAATGCTCTCTTCAAGGGGATGGCCATAATAGTTTCTGATAGTTTGTTTCCTTTTGTCTACTTTGGGTGTGGGACAGTATGCTTTGGAGGATTGTATTTTCTCGATATTCTTCATGGCACTACTGCAGCCTTGGTTGGGCAAAGTGGGAGTGGGAAATCCATAATTGTTAGTTTGATAGAGAGATTTTATGATCCACGGGCTGGTGAAATTCTCATTGATGGCATAAACCTCAAAGAATTTCAACTGAAATGGATTAGACAGAAGATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTGCAGTAGAGCTTGCTAATGCTACCAAATTTATAGATATACTTGCTTATGGTTGTGATTCATCACTGTTGCTGGCTGGACAGCCCTGTGCAGATCATGATAGGGCAAGTGGTGGAGGACTTCAGCCCCAAGAGTACACTATAATCAAGATGGAATTGCTTCCTCCTTTCACACATAAGTTTCAGGTGCTGGAGGGAAGGAAGGTATTCCTTGTTGCTGCAACATTAAGACATGAGACCATGTATGGCCAAACAAATACATGGGTGTTGCCTAATGGCAAGTATGGAGCTTTTGAAATCAATGAAACTGACGTGTTTATTCTAGCACACAGAGCAACCTTTAACCTTGCCTATCAGAACCACTCATGA 762 0.4331 MGEPILLRDRCILRIRNKSVQLSFAQTGYRNRNNALFKGMAIIVSDSLFPFVYFGCGTVCFGGLYFLDILHGTTAALVGQSGSGKSIIVSLIERFYDPRAGEILIDGINLKEFQLKWIRQKIGLVSQEPVLFAVELANATKFIDILAYGCDSSLLLAGQPCADHDRASGGGLQPQEYTIIKMELLPPFTHKFQVLEGRKVFLVAATLRHETMYGQTNTWVLPNGKYGAFEINETDVFILAHRATFNLAYQNHS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi486g00003 253 PANTHER LEUCYL-TRNA SYNTHETASE 157 252 IPR004493 GO:0000166|GO:0004823|GO:0005524|GO:0006429
Sebi486g00003 253 Gene3D - 172 253 IPR009008 GO:0002161|GO:0006418
Sebi486g00003 253 SMART AAA_5 71 198 IPR003593 GO:0016887
Sebi486g00003 253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 150 IPR027417 -
Sebi486g00003 253 Gene3D - 67 134 IPR027417 -
Sebi486g00003 253 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 190 252 IPR009008 GO:0002161|GO:0006418
Sebi486g00003 253 Pfam ABC transporter 68 133 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi486g00003 Sebi-Chr486 83071 84604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi486g00003 72 149 Calmodulin-binding Proteins AT2G36910 42.000 2.47e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi486g00003 K01869 - gmx:100777060 168.318