Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi485g00026 ATGGGTGATGCTCATGAGACTGATAAGAACATTGAGGTGTGGAAGATTAAGAAATTGATCAAGGCTCTTGAGGCTGCAAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCACGTGATCAAATTGCTCGCGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCTTCAAACATCAAAAGCAGGGTGAATCGGCAGTCTGTTCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAACAAGGTTCCTCCAAATGGGCTTGTTTTGTATACAGGCACAATTGTGACCGAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCATTCAGGCCTATTAATGCATCTCTGTATCTTTGTGACAACAAGTTTCACACAGAAGCTCTAAATGAGCTCCTGGAATCTGATGACAAGTTTGGATTTATTGTCATGGATGGAAACGGTACTCTATTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAGTTCAGTGTGGATCTCCCAAAGAAACACGGAAGAGGAGGGCAATCAGCTCTGCGTTTTGCTCGTCTTCGCATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCAACTCAGTTTTATATCAATCCTACTACCAGCCAGCCCAATGTTTCAGGATTAATACTTGCTGGTTCTGCTGATTTTAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAGATACTTAATGTTGTTGATGTATCTTATGGAGGGGAGAATGGGTTTAATCAGGCTATTGAACTATCTGCTGAAATTCTCTCAAATCCAGGATACTGGAAAGTATGTTTTTGGTGTTGATGATACTCTAAAAGCTCTGGAGATGGGAGCTGTTGAGATACTTATTGTGTGGGAAAATCTGGATATGAACAGGTATGTCTTAAAAAACAATGCTACTGGTGAGATTATCATTAAGCACTACAACAAGGACCAGGAGTCCAACCAGAGCAATTTTCGGGATCCTGCAAGCTCTGCTGATTTTGAGGTTCAGGAAAAGATGTCTCTGTTGGAGTGGTTTGCCAATGAATACAAACGGTTTGGTTGTACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGTATCTTGCGTTACCAGCTTGATATGAGATCATTTGATGATTTCTCTGATGATGGAGTATGGGAGGTGACTGCATGTGCTGCTGCTGCTGCAGTTCCTCCTCTTCCTCCTCATCTGCCCGTGGTGTTGCATGGAAAGTTTGATTGTGAATCAAGTGCCACAAATTTCAGCAACATTCCTGGCAACATCTGCTCCCCTGCTGTCTGCTCTGCTCACATTTACACTCAGAAAGAAAAAAATACATGCTTCCTGAAGCAACTCGACCTGGCATCAATGAAGGTCAGTCCTCATAAATGA 1476 0.4282 MGDAHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPTTSQPNVSGLILAGSADFKLSLVSQICLILDFRQRYLMLLMYLMEGRMGLIRLLNYLLKFSQIQDTGKYVFGVDDTLKALEMGAVEILIVWENLDMNRYVLKNNATGEIIIKHYNKDQESNQSNFRDPASSADFEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDDFSDDGVWEVTACAAAAAVPPLPPHLPVVLHGKFDCESSATNFSNIPGNICSPAVCSAHIYTQKEKNTCFLKQLDLASMKVSPHK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi485g00026 491 Pfam eRF1 domain 2 144 268 IPR005141 -
Sebi485g00026 491 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 4 239 IPR004403 GO:0003747|GO:0006415
Sebi485g00026 491 FunFam Eukaryotic peptide chain release factor subunit 1 2 135 - -
Sebi485g00026 491 Pfam eRF1 domain 1 18 138 IPR005140 -
Sebi485g00026 491 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Sebi485g00026 491 SMART eRF1_1_2 4 140 IPR005140 -
Sebi485g00026 491 Gene3D - 270 415 IPR029064 -
Sebi485g00026 491 Gene3D eRF1 domain 1 3 135 IPR024049 -
Sebi485g00026 491 NCBIfam peptide chain release factor aRF-1 13 269 IPR004403 GO:0003747|GO:0006415
Sebi485g00026 491 SUPERFAMILY L30e-like 279 402 IPR029064 -
Sebi485g00026 491 Gene3D eRF1 domain 2 136 269 IPR042226 -
Sebi485g00026 491 Pfam eRF1 domain 3 278 400 IPR005142 -
Sebi485g00026 491 FunFam Peptide chain release factor subunit 1 267 418 - -
Sebi485g00026 491 SUPERFAMILY Translational machinery components 142 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi485g00026 Sebi-Chr485 597136 599061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi485g00026 5 415 Eukaryotic Initiation Factors Gene Family AT3G26618 78.788 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi485g00026 K03265 - gmx:100785916 687.952