Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi482g00029 ATGGAAGACAGGAAAGTGCACACCATCGCTGTTATATCAGTGATTGCTCTGATCATTGTCATAATCGTTGCTCGTGTCTCCTTAAAGCTCTCAAGAGTTTTCTTCCTCATTTGTGGTGCTACTGTTGCTGTGATTCTTGCTGTCTTTTGTTGTTTATTCATCAGGCATCGTTACAACCGAAGAAGAAAGTTGTTGGAGTCAAGATTCAAATCAGAAGGCAGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCTATAAAGTTTCGATACAAGGAGCTTGAGGAAGCAACCGATGGTTTTCAAGCACTTTTAGGAAAAGGGTCCTCTGCTTCTGTTTTCAAAGGTATTCTCAATGATGGTACTTCAGTTGCTGTGAAACGAATTGATGGAGAAGAAAGAGGTGAGAAGGAGTTCAGATCAGAAGTTGCAGCCATTGCTAGTGTTCAACATGTGAACCTTGTAAGACTATTTGGCTATTGTAATGCTCCTACAGCACCTAGGTACCTTGTTTATGAGTATATTCCAAATGGGTCTTTGGATTGTTGGATTTTTCCTTCAAGGGAAAATAGGACACGTCGTGGTGGGTGTTTACCATGGAATTTGAGGTATAAAGTTGCAATTGATGTTGCCAAGGCACTTAGTTACCTTCACCATGATTGTAGATCAAGGATTTTACACCTTGATGTGAAGCCAGAGAATATACTTTTGGATGAGAATTATAAAGCGCTTGTTTCTGATTTTGGTCTCTCAACGCTTATTGGGAAGGATGTGAGCCAAGTGATGACAACAATAAGGGGAACTAGAGGGTATTTGGCCCCTGAATGGCTCTTAGAGAGGGGTGTTTCAGAGAAAACAGATATCTATAGTTATGGGATGGTTCTGTTGGAGATAATTGGAGGGAGGAGAAATGTGTGTAGGGTAGAAGATCCTAGGGACAAGTCTAAGACAAAATGGCAATTTTTTCCAAAGATTGTGAATGAGAAAGTGAGAGAAGGAAAGTTTATGGAAATTGTGGATTCTAGGCTAGTGGAAAGAGGGGATGTTGATGAGAGTGAGGTGAGTAGATTGGTGTATATTGCTTTGTGGTGTATACAAGAGAAACCAAGATTGAGGCCTAGCATGGCACAAGTGGTGGATATGCTTGAAGGGCGTGTGAGTGTGGAGGATCCTCCAGGTACTAGAATGATTCTTGTTGACTTGTTAGATGAAGAACCTGCAGATCATAATAATCTTGCAAGGTTATTAACATCTATATCGAGCCAGGATGATTGTACATCTACATACTCCATGGGAACCACTATTTTATCTGGTAGATAA 1332 0.4069 MEDRKVHTIAVISVIALIIVIIVARVSLKLSRVFFLICGATVAVILAVFCCLFIRHRYNRRRKLLESRFKSEGRELRIEYSFLRKVAGVPIKFRYKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGEKEFRSEVAAIASVQHVNLVRLFGYCNAPTAPRYLVYEYIPNGSLDCWIFPSRENRTRRGGCLPWNLRYKVAIDVAKALSYLHHDCRSRILHLDVKPENILLDENYKALVSDFGLSTLIGKDVSQVMTTIRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVCRVEDPRDKSKTKWQFFPKIVNEKVREGKFMEIVDSRLVERGDVDESEVSRLVYIALWCIQEKPRLRPSMAQVVDMLEGRVSVEDPPGTRMILVDLLDEEPADHNNLARLLTSISSQDDCTSTYSMGTTILSGR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi482g00029 443 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Sebi482g00029 443 PANTHER OS07G0415500 PROTEIN 32 397 - -
Sebi482g00029 443 SMART serkin_6 103 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi482g00029 443 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Sebi482g00029 443 FunFam Putative receptor-like protein kinase 70 178 - -
Sebi482g00029 443 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Sebi482g00029 443 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Sebi482g00029 443 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi482g00029 443 FunFam Putative receptor-like protein kinase 179 394 - -
Sebi482g00029 443 Pfam Protein kinase domain 108 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi482g00029 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi482g00029 Sebi-Chr482 528414 529745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi482g00029 1 398 Receptor kinase-like Gene Family AT5G20050 67.082 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi482g00029 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi482g00029 - - gmx:100779485 767.689