Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi482g00011 ATGGCCGAACGTGGCGGAGACCGTGGTGGATTTGGGCGTGGCTTCGGCGGTCGCAGACGCGACGACAGGGGCCGTGGTCGCCGCAGAGCTTCGGAAGGCGCGATGAAGAGGAGAAGTGGGTTCCACAAGGAAGTTGCCACCGCCATTCGCGGTGCCATCATCTTGGCCAAGCTCTCTGTCATTCCCGTCAGGAGAGGTTACTGGGGTAACAAGATTGGAAAGCCCCATAGTGTTCCCTGCAAGGTCACCGGAAAGTGTGGTTCAGTCACCATCCTCATGGTCCCCGCCCCTCGTGGTTCTGGAATATTCGCTGCTAGGGTTCCTAAGAAGGTCTTGCAATTTGCACGAATTGAGGACCTCTTCACCTCCTTCAGAGGATCCACTAAGGCTCTTGGAAATTTCGTCAAGGTTAGGGTTTCTATTACCTGA 429 0.5571 MAERGGDRGGFGRGFGGRRRDDRGRGRRRASEGAMKRRSGFHKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHSVPCKVTGKCGSVTILMVPAPRGSGIFAARVPKKVLQFARIEDLFTSFRGSTKALGNFVKVRVSIT 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi482g00011 142 Gene3D - 63 141 IPR014721 -
Sebi482g00011 142 FunFam 40S ribosomal protein S2 63 141 - -
Sebi482g00011 142 MobiDBLite consensus disorder prediction 13 39 - -
Sebi482g00011 142 Pfam Ribosomal protein S5, C-terminal domain 84 136 IPR005324 GO:0003735|GO:0005840|GO:0006412
Sebi482g00011 142 MobiDBLite consensus disorder prediction 1 39 - -
Sebi482g00011 142 PANTHER RIBOSOMAL S SUBUNIT 43 135 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Sebi482g00011 142 SUPERFAMILY Ribosomal protein S5 domain 2-like 76 137 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi482g00011 Sebi-Chr482 190634 191305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi482g00011 43 136 Cytoplasmic Ribosomal Protein Gene Family AT1G58983 89.362 3.80e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi482g00011 K02981 - mus:103973567 173.326