Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi482g00004 ATGGCTTCACCATCCGAACTAAGCCTTGATTGCAAGCCTCATAGCTATTCCATGTTACTCAAATCATTTGGAGATCAAAATCAAACTGATCAGAATCAGACCCACCATAAGCTTGAGGAGTTCCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCTTTCAAGCGTGAGCTTCCTCTCTGCATGCAACTTCTCACCAATGCCATGGAGGCTTCAAGGCAACAACTTCAGGCCTTCAGAGTGAATCAAAGCACAAGGCCAGTTTTGGAAGAATTCATACCAGTGAAGCATTTGACCTCTGAAAGCTCTGAGAAGGCAACAAACATGTCTGATAAGGCAAATTGGATGACATCTGCTCAATTATGGAGCCAAACAAGTGAAGGAACCAAACAACAATCCACAATCACATCACCTAAAGAAGCTGATATTGGATTCAGCATAAGCCCCAAACTAGTTCTAGACAACAAACAGAGGAATGGTGGAGCTTTTCTTCCATTCTCAAAGGAAAGAAACTCCTCCTGCCAATTAGGCTCTGCATTGAGGGGTCTCCCTGAGTTAGCCCTTGCCTCTGCAGAGAAAGAAATGGAAGACATTAAGAAACATGCAGAGGCAGAGAAGGGAGTAGTAGTCTCATGTCAGATTCAGAAGAAGGAGAATAATTCAAGCAATGATGGAGCATTAGTTGATCAAGGTAAAGGGAATAATAATCAAGTTGCATCCAATGCTCAAACAACCACAACCAGTAATAGCACCACAACCTCCCAAACTCATAGGAAAGCAAGAAGATGCTGGTCACCAGACTTGCACCGTAGATTTGTCAATGCCCTTCAAATGCTTGGTGGATCTCAAGTGGCAACTCCAAAACAAATAAGGGAATTGATGAAAGTTGATGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGGTATTTCTCTCTCACTCACTCAAGAGGCATGAAAATTGA 969 0.4252 MASPSELSLDCKPHSYSMLLKSFGDQNQTDQNQTHHKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFRVNQSTRPVLEEFIPVKHLTSESSEKATNMSDKANWMTSAQLWSQTSEGTKQQSTITSPKEADIGFSISPKLVLDNKQRNGGAFLPFSKERNSSCQLGSALRGLPELALASAEKEMEDIKKHAEAEKGVVVSCQIQKKENNSSNDGALVDQGKGNNNQVASNAQTTTTSNSTTTSQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQVFLSHSLKRHEN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi482g00004 322 MobiDBLite consensus disorder prediction 220 262 - -
Sebi482g00004 322 SUPERFAMILY Homeodomain-like 257 314 IPR009057 -
Sebi482g00004 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 316 IPR044787 GO:0003700|GO:0006355
Sebi482g00004 322 Gene3D - 259 315 - -
Sebi482g00004 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Sebi482g00004 322 MobiDBLite consensus disorder prediction 220 260 - -
Sebi482g00004 322 Coils Coil 189 209 - -
Sebi482g00004 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 260 315 IPR006447 GO:0003677
Sebi482g00004 322 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi482g00004 Sebi-Chr482 60524 62062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi482g00004 1 316 G2-like Transcription Factor Family AT2G03500 54.154 4.08e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi482g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi482g00004 - - gmx:100797015 443.736