Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi481g00032 ATGCCAATCCCCTCTGAGAGGCATATGTTCCTTCAAACAGGAAATGGGTCTGGTGATTCTGGACTTGTGCTCTCAACTGATGCAAAGCCTAGATTAAAATGGACACCTGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACGGTAATGAAACTCATGGGGATTCCAGGGCTTACCTTATATCATCTAAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCATGGACAAAGCAACAACGTGACACACAAAATCAGTGCAGGAACTGGAGAGAGACTTTCTGAAACCAATGGAACTCACATAAATAAATTAGCCTTGGACCACAGCCTAACAAGTACAGAGACACTTGCAGGTTCGGATAGAAGCCCAAGGAAAGTACCTCAATCTGTGCTGAGAAAGGCACAAGAGACTCTTGGTAGACAAAATTTGGGAATAGTAGGACTTGAAGCTGCTAAAGTTCAACTTTCAGAGCTTGTGTCCAAAGTATCCTCTCAGTGTCCTGAACTCAGCATTTTCAGAGCTAAAGGAACTACAAGGATTTTGCCCCCAGCAAACACAAACCAACCAGCCAAATGA 615 0.4341 MPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAGTGERLSETNGTHINKLALDHSLTSTETLAGSDRSPRKVPQSVLRKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCPELSIFRAKGTTRILPPANTNQPAK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi481g00032 204 SUPERFAMILY Homeodomain-like 28 84 IPR009057 -
Sebi481g00032 204 NCBIfam myb-like DNA-binding domain, SHAQKYF class 29 84 IPR006447 GO:0003677
Sebi481g00032 204 FunFam Myb family transcription factor 28 86 - -
Sebi481g00032 204 Gene3D - 28 86 - -
Sebi481g00032 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 86 IPR017930 -
Sebi481g00032 204 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 184 IPR044848 GO:0003700
Sebi481g00032 204 Pfam Myb-like DNA-binding domain 31 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi481g00032 Sebi-Chr481 777212 778862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi481g00032 15 184 G2-like Transcription Factor Family AT1G69580 41.709 1.14e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi481g00032 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi481g00032 - - gmx:100810396 285.804