Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi480g00013 ATGGGGAACAAAATCGCGCGCACAACGCAAGTTTCGGCGTCGGAGTACTACCTGCACGAGCTGCCGTCGACGTACAATCTGGTGCTGAAGGAGGTTCTCGGACGCGGTCGTTTCTTTAAGTCGATTCAATGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTTTATTTCAAGCGAGGCGATTCCCTCGATCTCTCTGACTACGAGCGCCGTCTCTCTCAAATCAAGGAAATCTTCAGCGCCATTGATCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCGTACCTTTTGAGGCAATATTTCTTCCATAATCTGCATGATCGATTAAGCACTAGGCCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTCCAGTTGCTTTTAGCTGTAAAACAAAGCCACGAGAAGGGAGTATGTCATGGTGATATCAAGTGTGAGAATGTGCTGATTACGTCTTCGAATTGGCTTTACCTTGCTGACTTCGCATCTTTCAAACCCACTTACATTCCATATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGAAGAAGACTCTGTTATCTAGCACCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATACCCCCTTAAAGCCTTCTATGGATATATTTGCTGTTGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACAATATGATCCAAGTCAACATCTTGAAAAGATACCAGATATTGGAATCCGTAAGATGATTCAACACATGATTCAGTTAGAACCCGAGTCTCGATTTTCTGCTGAAAGATATATAAAGGAATATGCTGGAGTTGTATTCCCGACCTATTTTTCACCGTTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTTCATTCTGATATGAGGGTTTTACTATGTCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAGCAGTCATCTGATGATGCAGGTGTTACTTCTGGTGAGCTTTTGGAAGAGATGGTTGCTAAAGAAAGTGTGAGTTTCATGAAGGATTCACTGATGAAAAGAGAGGACATAGGAAAAAGCTTAGTTCATGATCACTATGAACTTCTTGGTGATATTAATAGCCTACTGAGGGATGCTAAAAAAAATAATAATCCATCTGGTCCCCAGCATGTAACAGGAAATGCACACAATTCTAACTTCCCGGAAAATCTAAAAAATTTACAGTCTCCTGGTGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGATCATCCCTTTTTGAAAAGTATCACTATGAATGATTTAAATTCGTTGATGTCCGAGTATGATAGCCAATCAGATACATTTGGAATGCCTTTTCTTCCATTACCACAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTTTGCTCCTGCATACGCAATGTCAAGTTGTCTCACTTGAGAAGGGCGGCTGTACTCTTGTTGAAGGCATCTGCCCTCTATATTGATGATGAAAATCGTTTGCAGCGTGTTATCCCATATGTGATTGCAATGCTTTCTGATCCGGCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTTTGCCCTTAGTACGAGATTTTCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCTATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTAACTGCTTATGGGTTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCACCAAAGAAGCCATTAACATCATCCACTCAGACCTCTGGAAGAATGAATAGGATAAATAGTGATGTCCAACTTCTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATTGTTAAGGACAGTATTCTACGAAAAGATTGTTTATGTCTGCTTTTTGTGGGACAAAGAAGTGTAGAAGAATATCTACTGCCTTACATTGAGCAAGCTTTAAGTGACATGACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGACTATTCTATGCAAAAATGGGTACTTTCGGAAGAGGATATTGCTACAAATGATAGATCGTGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCGGCTGTCGCTTTCATTGCTGCTAGTAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGGCCTTTTCTTCGTAGACAACCTGTTTCTCTTGCTTCAGAGAAAGCTCTCTTGTCTTGTTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTGGAGAACTCCAGGAGTTCAGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAATCTAAACTATGGGAAATGGATTTACTAAAAAAAGGAATTGATGAGTTGAATTCGATAAAGAACTGGACTGACAAGCAACAAGGTCCTGGGGTTCAACAAGCTATTGGCACTACCTTCCAACAGCCAGGGCTAACTGATTGCGACAAAGCTGAAGCAAAATTGAGAGATATGGGGGCTTTTATGCATAATGATAACATGGTGGCACATCGTGATTCCCAGTGCTTAGAGAAGTTACAGTTTTCAGGATTTACGTCACCAATGTTCAGTGGTGTAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCTTTCAGTGTTGACAGGCGAGGAATGGGATTACCTCCTCCTGCAGCATCTGATTCTCCACTACAAATGAATTCTCTGGGTGTTAGTTCGTCTGCAATGCCTTGGGTTAATCCACTAAGTAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGGTTTTTTCAGGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCCACCGAGTGGTACATGAACCAGATGCCAGGGAAAATGAGACAGCCTATGTTAATAACACATTTCAAGATGTGGGATTATCTTCTAATATTAAAGGTACTTCAATTTCACTGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCTTTTGCTCGAACATCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTGTTGGTTGCTCACCTCCAAGAGCACCGTTCGGCTGTCAATGATATAGCGATTTCTTCTGATCAAAGCTTCTTTGTCAGTGCATCTGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGTTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTACCACCTGGAGGGAAGTCGTTCACTATGTGCAGCCATGCTTCCAGGTTCTGCACAAGTGATAATTGGAGCATCTGATGGGTTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAAAAGTATTCTGGTATTGCTGATATCACAAAGAAGGATATAAAGGAAGGTGCCATACTCAACCTTTTAAATTGCCCTGTGGATAATTATACCATTATGTATAGCACCCAGAACTGTGGCATTCATCTGTGGGATACTAGGTCAAATTCCAATACCTGGACCCTGAAAGCTACTCCTGAGGAGGGCTATGCTGCTTCTCTGGCATCAGGGCCTTGCGGCAATTGGTTTGTATCAGGGTCATCCCGGGGTGTTATTACACTTTGGGATCTGAGGTTTCTTATACCTGTGAACTCTTGGAAATATTCTCTTTCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTCCTCATCCAAATGCTTCTCTGTCTTCAACTGCCAGGCCCCTTGTATATGTGGGTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAAAATGCTAGCTGCCACCAGGTATTGAGGGCGGCCAATTATGACAGTGATGCAGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAAGTAAGCCAACTTCTCAATCAGATCTCAGACGAAATATTAATCGCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCCTGGTATTCGTTCATTACTTCCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACTGATCTAAAGATACGTCGATGGGATCATTACAGTCCTGACAGAAGTTACTGCATTTGTGGACCAAACTTAAAAGGAGTAGGAAATGATGACTTTTACGAAACAAAATCTAGTTTCGGAGTGCAAGTTGTACAGGAGACCAAAAGACATCCTCTTGCAACGAAGTTGACAGCGAAGGCAATTCTTGCAGCTGCTGCCACTGATTCTGCCGGTTGCCATCGTGATTCTATTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTATTGTCAAGTGGTAGAGATGGAGCCATCAAGGTTTGGAAGTAA 4524 0.4211 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSLDLSDYERRLSQIKEIFSAIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDTPLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAERYIKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESVSFMKDSLMKREDIGKSLVHDHYELLGDINSLLRDAKKNNNPSGPQHVTGNAHNSNFPENLKNLQSPGELLQTISNAFRGNDHPFLKSITMNDLNSLMSEYDSQSDTFGMPFLPLPQDSMRCEGMVLITSLLCSCIRNVKLSHLRRAAVLLLKASALYIDDENRLQRVIPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSPKKPLTSSTQTSGRMNRINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIVKDSILRKDCLCLLFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLTILCKNGYFRKRILLQMIDRAFPLLCYPSEWVRRSAVAFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELNSIKNWTDKQQGPGVQQAIGTTFQQPGLTDCDKAEAKLRDMGAFMHNDNMVAHRDSQCLEKLQFSGFTSPMFSGVNSLTYEKPSEGIPLYSFSVDRRGMGLPPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFNLASSVPAPKVFSGSFSISNGSKQFHRVVHEPDARENETAYVNNTFQDVGLSSNIKGTSISLEDATAQTDLSGFPSFARTSIPDSGWRPRGVLVAHLQEHRSAVNDIAISSDQSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRSLCAAMLPGSAQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYAASLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWKYSLSCPIEKMCLFLPHPNASLSSTARPLVYVGAGCNEVSLWNAENASCHQVLRAANYDSDAEMSDLPWALARPSSKPTSQSDLRRNINRKYRVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRHPLATKLTAKAILAAAATDSAGCHRDSIVSLASVKLNQRLLLSSGRDGAIKVWK 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi480g00013 1507 ProSiteProfiles Trp-Asp (WD) repeats profile. 1091 1123 IPR001680 GO:0005515
Sebi480g00013 1507 MobiDBLite consensus disorder prediction 399 420 - -
Sebi480g00013 1507 SUPERFAMILY Protein kinase-like (PK-like) 26 324 IPR011009 -
Sebi480g00013 1507 Gene3D - 1014 1192 IPR015943 GO:0005515
Sebi480g00013 1507 CDD STKc_Vps15 16 303 - -
Sebi480g00013 1507 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 682 IPR045162 GO:0004674|GO:0016236|GO:0045324
Sebi480g00013 1507 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi480g00013 1507 ProSiteProfiles HEAT repeat profile. 530 562 IPR021133 -
Sebi480g00013 1507 ProSiteProfiles Trp-Asp (WD) repeats profile. 1474 1507 IPR001680 GO:0005515
Sebi480g00013 1507 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1068 1132 - -
Sebi480g00013 1507 Gene3D Transferase(Phosphotransferase) domain 1 21 380 - -
Sebi480g00013 1507 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi480g00013 1507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1474 1507 - -
Sebi480g00013 1507 Pfam HEAT repeat 530 558 IPR000357 GO:0005515
Sebi480g00013 1507 Gene3D - 1196 1507 IPR015943 GO:0005515
Sebi480g00013 1507 Gene3D - 642 812 IPR011989 -
Sebi480g00013 1507 Gene3D - 479 616 IPR011989 -
Sebi480g00013 1507 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 476 615 - -
Sebi480g00013 1507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1091 1123 - -
Sebi480g00013 1507 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Sebi480g00013 1507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Sebi480g00013 1507 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi480g00013 1507 Pfam WD domain, G-beta repeat 1087 1123 IPR001680 GO:0005515
Sebi480g00013 1507 SUPERFAMILY WD40 repeat-like 1085 1507 IPR036322 GO:0005515
Sebi480g00013 1507 SUPERFAMILY ARM repeat 281 796 IPR016024 -
Sebi480g00013 1507 SMART WD40_4 1134 1171 IPR001680 GO:0005515
Sebi480g00013 1507 SMART WD40_4 1231 1272 IPR001680 GO:0005515
Sebi480g00013 1507 SMART WD40_4 1379 1413 IPR001680 GO:0005515
Sebi480g00013 1507 SMART WD40_4 1084 1123 IPR001680 GO:0005515
Sebi480g00013 1507 SMART WD40_4 1467 1507 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi480g00013 Sebi-Chr480 461928 469964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi480g00013 29 288 MAP Kinase Gene Family AT2G01450 25.497 1.16e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Sebi480g00013 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi480g00013 K08333 - gmx:100818467 2730.28