Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi47g00084 ATGGGTGAAGCATGTGAGCAGGAACTGGGTTTAATGAGCATTAATGAGAACAGTGACAAAAGTGATTCAGTTCCTCCAGAAAGCCAGAATGTGTCTGGTTCAGCCCAAGTGACTGATCTACCCAGTAAGGATAAAGCTTGGGTTGGCACATCTTCAATACCTGAGTCAAGCTCAGAACCTCGTATTCTGGACCAAGCGGCTGGACCTGCCAATGAATGTATACCCAAGTTATACTGTCCCGGTAAAAAAGCTCCTGGACTATATGAATATGATGATCTGTATGATGATGATTTCATCATAGATGAAGTGGATCTTGAACTTGAGAACTATGAGGAACTTTTTGGTATGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTATTTGAGACAAAGGACATGTCTGTTAGTGCTGGTGATTCCAATTGTCAGGGTGCTGTTGCTGCTGAGTTTAAAGCTGCACACCTTGGAATTTTGATGCAATTATGTTCTACACCGTACACTGATCATCTAGTCTGTTCACCTGTGTACATTATTTCCTGTTATCCCCCTGATCATCTGGGGTCATCAGCTGGGTTGGTCAATGCTATTCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTAAGTACTAAAACTGAACCAGTTCTTTGTTTTACCGGAAGGCAATCCCAATCAAACATTTCCTTTTCTGGTGCTGCCAAAGATAGTAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGTCCTGAGAGTTCTATGCAATCTGCTACTCGCAGCAATGCTGTCATGCGTTATAAGGAAAAGAAAAAGACCCGGAAGTTCGACAAGAGAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGACGTGTGAAGGGCCGGTTTGTCAAAGCTGGCGATGTCTATGATTATGACCCTTTGAGCCAAACAAGAAGCTACTGA 1011 0.4392 MGEACEQELGLMSINENSDKSDSVPPESQNVSGSAQVTDLPSKDKAWVGTSSIPESSSEPRILDQAAGPANECIPKLYCPGKKAPGLYEYDDLYDDDFIIDEVDLELENYEELFGMALSHSEELFENGGINSLFETKDMSVSAGDSNCQGAVAAEFKAAHLGILMQLCSTPYTDHLVCSPVYIISCYPPDHLGSSAGLVNAIQPACSNAASADSMLSTKTEPVLCFTGRQSQSNISFSGAAKDSSAGDYQDCGASSMLLMGEPPWCPPCPESSMQSATRSNAVMRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSQTRSY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi47g00084 336 MobiDBLite consensus disorder prediction 1 61 - -
Sebi47g00084 336 MobiDBLite consensus disorder prediction 11 39 - -
Sebi47g00084 336 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 93 323 - -
Sebi47g00084 336 ProSiteProfiles CCT domain profile. 279 321 IPR010402 GO:0005515
Sebi47g00084 336 Pfam CCT motif 279 321 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi47g00084 Sebi-Chr47 2578622 2582651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi47g00084 4 336 C2C2-CO-like Transcription Factor Family AT5G48250 42.059 7.77e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi47g00084 CCT 3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi47g00084 - - gmx:100787695 446.432