Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi47g00069 ATGAGTATCATGGATTTCCAAGTCGTCGTTCTCGGCGGTGGCGTCTCCAAAAAACTCCACCCTCTCGTCTCACAGGAGCTTCCAAAGGCTCTACTTCCGGTTGCGAACCGCCCAGTTCTCTCTTACGTGCTCGAGTCATTGGAGCTTAGCAACCTTAAAGATCTCATTGTGGTAGTTGAAGGTGAAGATACGGCTCTTCATGTTGGGGGTTGGATTTCAGGGGCTTATGCTGATCGCCTCCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTGGGAACAGCTGGTGCAATTCGGGCCATCGCGCACCACCTAACTGCAAAAGACATTTTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCCGTTGCAGCTACTCATAGACGACATGATGCAGTTGTCACTGCTATGCTTTGCTCTGCTCCTGTAAGTGGTCCTTCAGAATCAGTCTCTTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTAATAGGACTGGACCCCACAAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATATCCCGTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGGGTGCATTTCATAGCTTAAAGCATGATGTATTGCCATATCTTGTTCGGAGCCAACTGAGATCAGAAGTATTATTAAATGGTATACCACAAGCAGAAGAAAATGGAACTGAGAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTTGCTAATGCATCTGAACCGACCTTTCATCTACGACATGCACTGTGCCCTAACGGCTCTACTTCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTACTGTGCTCGCCTAAATTCTTTACAAGCATATATTGACATAAACCGAGATGTGATAGGAGAAGCTAATCATTTGTCTGGGTATTCCTTCTCTGCTCACAACAACATTATCCATCCTTCTGCAGAGCTGGGGGCAAAAACAACTGTAGGACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGCTCTGTCATTGGTCGTCACTGTAGGATAGGTGCCAGTGTTAAGGTTGTTAATTCGGTGGTTATGAATCATGTTACTATTGGAGACTCTTGTTCAATTCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGTCAAGTTGGAGCAGGTTTTGTGGTCACTGCTGGTAGTGAATGCAAAGGGGAGGTCTTGGCCAAGAAATGA 1389 0.4471 MSIMDFQVVVLGGGVSKKLHPLVSQELPKALLPVANRPVLSYVLESLELSNLKDLIVVVEGEDTALHVGGWISGAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSISRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKGAFHSLKHDVLPYLVRSQLRSEVLLNGIPQAEENGTEKVISQSNQQMLSQILANASEPTFHLRHALCPNGSTSVRRTHKCCVYIAGSSKYCARLNSLQAYIDINRDVIGEANHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGASVKVVNSVVMNHVTIGDSCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSECKGEVLAKK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi47g00069 462 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 462 - -
Sebi47g00069 462 Pfam Nucleotidyl transferase 9 148 IPR005835 GO:0009058
Sebi47g00069 462 CDD eIF-2B_gamma_N 6 223 - -
Sebi47g00069 462 MobiDBLite consensus disorder prediction 145 165 - -
Sebi47g00069 462 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 352 IPR029044 -
Sebi47g00069 462 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 428 IPR029044 -
Sebi47g00069 462 Gene3D Hexapeptide repeat proteins 353 457 - -
Sebi47g00069 462 CDD LbH_eIF2B_gamma_C 373 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi47g00069 317 453 Eukaryotic Initiation Factors Gene Family AT4G18300 30.519 1.76e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi47g00069 K03241 - gmx:100783346 807.749