Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi47g00055 ATGATAGCATGCATTATGGCTGCAATTCAGTCATCAATAATAGGCGTTTGCTTAGATTCCAGTAAGGCTGCTTGGACATTACGGTGGAATCTACAACTTGTAACTATAGTGTACTCGGGAGCATTGGCTACAGCTGCTACATTTACCTTGATATCTTGGGCAATTGCAATCAAAGGACCAACTTATCCCCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCAATATCAGAAGCTATCATACTTGGGGAACCACTAAGTATTGGATTGTTGGTGGGGATGGTTTTGATCATATCAGGATTGTACTCCTTTTTGTGGGGCAAAACAAATGAGAAACCACGCTTGCCTCAAACAAATGTAGCAGCTGCAGAAATGTCAACAAGCATGGCTGATGACCCTGCTATGATGCAACAATCAACAGCAGTTGTAGTACCAAGTCCTTCATCTCATGAAAGTGTAGTTCTTGAAATTGAAAAGACTGGCAAAAACTGA 492 0.4126 MIACIMAAIQSSIIGVCLDSSKAAWTLRWNLQLVTIVYSGALATAATFTLISWAIAIKGPTYPPMFNPLALIFVAISEAIILGEPLSIGLLVGMVLIISGLYSFLWGKTNEKPRLPQTNVAAAEMSTSMADDPAMMQQSTAVVVPSPSSHESVVLEIEKTGKN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi47g00055 163 PANTHER WAT1-RELATED PROTEIN 2 125 IPR030184 GO:0016020|GO:0022857
Sebi47g00055 163 Pfam EamA-like transporter family 2 104 IPR000620 GO:0016020
Sebi47g00055 163 SUPERFAMILY Multidrug resistance efflux transporter EmrE 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi47g00055 Sebi-Chr47 1463822 1465321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi47g00055 1 108 Nodulin-like Gene Family AT1G09380 38.889 2.44e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi47g00055 - - psat:127112970 207.223